Pseudomonas putida GB-1, PputGB1_3261
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida GB-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGACCAGCGCCTGAGCACGCGGCTTTACCGCACTTGCCCGATTCTGGCGGTGGTGCGCGACGACCACCCGTGGGCGCGACAGGCGAGTGTCAGCGTCAA GGACATTGCCGGCCAGCGGGTGGTATTGCGCGAAGCGGCATCGCGCACCCGGCAACTGGTCGAAGAAGGCTGCCGCCAGCATGGCGTGACACTGGATTGC GCGATGCAGTTGAACAGCCGCGAGGCCATCGTGCATGCGGTGGTGCATGGTATTGGCGTGGGCTTTGTCTCGGCAGTGGAGTACGCCGACCGCCCCGGCA CGCGCTCCATCGCCTTTGCCGAAGACCCGTTCCACATCCATTACTACCTGTGCTGCCTGGGCATCCGCCGTAACCGGGCGATCATCGCCGAGCTGTTCGA CGCGCTCAACGCGCACTGATGCCCCCATGACCACCGCGAGCCTGCCAGTGTGCCGGGCGGGCCGCGCGCACCCTGAGTTCTTACCCACTGGAGTTTTGCC
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| DNA Sequence for Gene |
>PputGB1_3261
ATGCACTATCAGCAACCCAAGCAACTGCAAGCCGCCATTCTCGACTGGGCCGGCACCGTGGTGGATTTCGGCTCGTTCGCCCCCACCCAGATCTTTGTCG AGGCCTTTGCCGAGTTCGGCGTGCAGGTCAGCCTGGAAGAAGCCCGCGGGCCCATGGGGATGGGCAAGTGGGACCACATTCGCACCCTGTGCAATGTGCC GGCCATCGCTGCACGTTACCAGGCCGCCTTCGGCCACACGCCAAGCGACGACGATGTAACAGCCATCTACGAGCGCTTCATGCCCTTGCAGATCGAGAAG ATCGCCGACCATTCGGCGCTGATCCCCGGAGCGCTGGAGGCCATCGCCCAGATGCGCCAACAAGGGCTGAAAATTGGCTCGTGCTCGGGTTACCCGGCGG TGGTGATGGAAAAGGTAGTGGCCCTGGCCTTGCGCAACGGCTACAGCGCCGACCACGTGGTGGCAACCGACGAGGTACCCAATGGCCGCCCCTACCCCGC GCAGGCACTGGCCAACGTGGTCGCCCTGGGGGTGAGCGACGTGGCAGCTTGCGTCAAGGTCGACGACACCTGGCCGGGCATTCTCGAAGGGCGCAGCGCC GGGATGTGGACCGTGGCCCTGACCTGCTCAGGCAACGCGCTTGGGCTCACCCATGAGCAGTACAAGGCCCTGCCCGAAGCGGAACTGGAACAGCAACGCC AGCGCATCGGCAGCCTGTTCGAAGGGTCGCGACCGCATTACCTGATCGACACCATCGCCGAGCTACCCGGGGTAATCGCCGATATCAACGCCCGCCTGGC GCGCGGGGAAATGCCCCAGAGCCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACCTAAGCTGCGCGGTCAACCCCGCACCCACAAGGATTGCGCCGGCCTTCAGGGTTGTGCAACGCCCTTGTGGGCGCGGGCTTGCCCGCGAAGAGGCCA GCACAGGCCCAGCAAAGCTGTATACAATCAGCAAAAAGCTTGATTACAATGCCCTGCGCCTATGACATCGGTAATCGCCGATGCGTATTGCGGCAGGCTT ACGCCATGTCACCTACAACCCCTGCAAAAACGCTACTCGTCAAAAACGCCGCTCTGTTGGTCACCATGGACGGCCAACGCCGCGAGATCAAGAACGGCGG CCTGTTCATCGAAGACAACCTGATCAAACAGGTCGGCACCAGCGATACCCTGCCACAACAAGCCGACGTCGTCCTCGACATGGCCGGCAAAGTGGTCATC CCTGGCCTGGTCAACACCCACCACCACATGTACCAGAGCCTCACCCGCGTGGTACCGGCGGCCCAGGACGGCGAACTGTTCAACTGGCTGACCAACCTGT
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| Amino Acid Sequence |
>phosphonoacetaldehyde hydrolase
MHYQQPKQLQAAILDWAGTVVDFGSFAPTQIFVEAFAEFGVQVSLEEARGPMGMGKWDHIRTLCNVPAIAARYQAAFGHTPSDDDVTAIYERFMPLQIEK IADHSALIPGALEAIAQMRQQGLKIGSCSGYPAVVMEKVVALALRNGYSADHVVATDEVPNGRPYPAQALANVVALGVSDVAACVKVDDTWPGILEGRSA GMWTVALTCSGNALGLTHEQYKALPEAELEQQRQRIGSLFEGSRPHYLIDTIAELPGVIADINARLARGEMPQSR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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