Pseudomonas putida GB-1, PputGB1_2882
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida GB-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCTGGATGACGCCTTCGGTGCACAGGCGCTTGAGTACTTCGCGCACACTGAGGAACGACAACGGGATATCCAGTTGTTCCAGTTGTGCATGCACACCGC GCACGCCAATACTGCGGCCATTGCGGTCGGCGGCGTGCAAAGCGTCGATCACCTTGAGGCGGATCAGGCTGGTGCGCAGGCCGAAGGTGCGCAGCAGCTC GCGGATCTGTTCATTGCCGATGCGTTCTTCAGAAAAAGCGTCCTGTCCATTGGGCGCTTTGCCTGGGACGCGCCCGGCCTGGATCGAGGGTTGCGGGTTG TACATGTGAATGCTCCTTTTCGTGGACGAACCCGAAATGTGGTTGCCTCACTTACTAGGACGAATGAGAACGCAAAAACTGCAACCCACTCGTAAAAAAA TGCCTGCTCCTCATCAAGACGTTCCATCGCCTTGTAATACGTAAAATTTTCATCTGGCCATTCGTCTGATCGGGATGACCCCCGAATCCGAGGAGTGCCC
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| DNA Sequence for Gene |
>PputGB1_2882
GTGTTTCCACTTTCCCGTCCCATGACGTGCGCCGGCCTGGCCGCTGCCCTGGTGGCCTTCAGTATCGGCGTACAGGCGCAGCCCGCCGTAGCCGATAGCA GTGCCCAGATCCGCCGCACCAGTTTTGGCGTGCCGCATATCGTGGCCAAGGATGAGCGCGGCCTGGGTTATGGCGTTGGCTATGCCTATGCCCAGGACAA CCTGTGCCTGCTGGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGATCGCGCTTTTTCGGCGCCAAGGGCAAGACCCTGGAGCAGCGTGACAACCTGGCC AGCGACCTGTTTTTCACCTGGCTCAACAGCCCTGCGGCGGTCGATGCGTTCCTGCAGGCACAGCCAGCGCCGGTACAGGCACTGCTGGCGGGTTATGCCA GCGGCTACAACCGGGCATTGGCCGAGCGCCGTGGCCAAGGGCTGCCCGCCGAATGCGGCGAGGGTGAGTGGGTGCGGCCTATCAGCAGCCAGGACCTGGT CAAACTGACCCGCCGGTTGCTGGCCGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGCTGGCGGGGGCACACCCTCCAGCACTGACCCGCCAGGCATCCTCA GCGGGTTTTGCCGCTGCGCTGGCCCGGCAGGAGCGGTTCGCCTCGGAGCGTGGCAGCAATGCTGTGGCAGTAGGTGCGCAGCGTTCGGCCAATGGCCGCG GCCTGTTGCTGGCCAACCCCCACTTCCCGTGGATGGGCGGCATGCGCTTTTACCAGATGCAACTGACCATTCCAGGCCAGCTCGACGTGATGGGCGCAGC ATTACCGGGCCTGCCGATGATCAACATCGGTTTCAACCAGCACCTGGCGTGGACGCACACCGTCGACACCTCTAAGCACTTCACCCTCTACCGCCTGCAG CTCGACCCCAAGGACCCGACGCGCTACTTGCTCGATGGCAGGTCGCTACCGCTGGCCCGGCAAACCATCCGTGTGGCGGTCAAGGCCGAGGATGGCAGCC TGAGCCAGGTAGCGCGGCAGGTCTACAGCTCTCAGTTCGGCCCGGTGGTGCAATGGCCAGGTCGCCTGGACTGGGATGTGCATGCGGCCTACAGCTTGCG TGACGCCAACCTTGAGAACACACGTGTATTGCAGCAGTGGTACCAGATCAACCGTGCCGACAGCCTCGCGGCATTGAAGGGTTCGGTCGAGCAGTTGCAA GGCATCCCTTGGGTCAACACGCTGGCCGTGGACCAGGGTGGGCGGGCTTTGTACCTGAACCAGTCGGTCGTGCCCTATGTCGACCAGCAACTGCTGGATA CCTGCAGCAACCCGCAGGCGCAAGGGCGCGTGGTGGTGCTGGATGGTTCGCGTAGCGCCTGCCAGTGGAAGGTGGACGCGCAGGCGGCGCAACCGGGCAT TTTCCCGGCCCGCTTGCTGCCGAGCCTCGAGCGTGAAGACTTCGTGCAAAACTCCAACGACCCGGCCTGGATGGTGAACCCTGCACAGCCGCTGACCGGC TACTCGCCCTTGGTCAGCCGCAATGACCAGCCGCTGGGCATGCGTGGCCGTTTTGCCCTGCAGCGTTTGCAAGGCACCGCCCGGTTGGGTGTGGATGAGC TGCAGCGCATGGTCACCGATGACGAGGTCTACCTGGCCAGCCTGGTGCTGCCGGACCTGCTGCAATGGTGCAAAGGTGCCAGCGCGGATGTGCAGGCCGT GTGCAGCAGCCTGGCTGCCTGGAACGGCAAGGCCGACCTGGACAGTGGCATTGGCCTGGTGCATTTCCAGAATCTGTTCACTGCCTTGGCCGAGCACCCG GAAAGCTGGCGGGTGGCGTTCGACCCGGCCGACCCGCAGCACACCCCGCGCGGCCTTGCGGTCGAGCAAGCCGCGGTGCGTAAGCTGGTACACGATGCAG CACTGGCGTCGATCAAGCAGGTAAGTGAGAGTGGCGTGGCCGGGGAGGCGCGTTGGGGGCAGGTGCAGCAGGCGCTTGATGGCACGCCGGTACCGGGTGG CCCGCAGGCGCTGGGGGTGTACAACGCGATTTACAGCGTGCCGCACGGGCACGGCAAGCGGCTGGTGGTCAGTGGTACCAGCTACCTGCAACTGGTCAGC TTCACCGACAAAGGGCCAGAGGCGCGTGGGCTGCTGGCGTTCTCGCAGTCCAGCGAGGCCGCTTCGGCGCACGCCAGTGACCAGACCAAGGCCTTCGCGG CCAAGCAACTGGCGCTGATACCGTTTACCGAGGCACAGATCAAGGCGGACCCTGAGTACCGGGAATCGGTGATCAGTGAGCGGGACAAGGGGGCAATGGC GCAGCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCATGCTGGCCACTTCGCGGGTCACCCCCGAAGTGGCCAGTGCTGGCAACCCGCTGGTGTCGGGGTCAGGAAAACTCGAACGGCGCCAGCTGGAACCCT TGCTCGTCAACCTGCAGGGCCCAACCCCGGCGGTCCCAGTCGCCCAGCACGATGCGCCGTGCTGGCTGCCCATCGACCATCAGCTTGTGGATCGCCGGGC GGTGGGTATGGCCATGCACCAGCGTGCGCACGCCATGCGCCGCCATCACCTTCGGTACTTCCTCCGGCGTGACGTCGACAATTTCGGTGGATTTCATCCG CGTTTGCGTGCGGCTTTCGCTGCGCAGCTTGCGCGCCAGTTTGTAGCGGGACGACAACGGCAGGTGGCGCAAAATCCACAAGCTCAGCGGGTTGCGCAGC AAACGGCGCATTTTCATGTAACCCAGGTCGCGGGTGCACAAAGTGTCGCCATGCATCAGCAGCACCTGTTCACCGCCCAGCTCGATCACGCTGGGGTCGC
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| Amino Acid Sequence |
>peptidase S45 penicillin amidase
MFPLSRPMTCAGLAAALVAFSIGVQAQPAVADSSAQIRRTSFGVPHIVAKDERGLGYGVGYAYAQDNLCLLANEVLTVSGERSRFFGAKGKTLEQRDNLA SDLFFTWLNSPAAVDAFLQAQPAPVQALLAGYASGYNRALAERRGQGLPAECGEGEWVRPISSQDLVKLTRRLLAEGGVGQFVEALAGAHPPALTRQASS AGFAAALARQERFASERGSNAVAVGAQRSANGRGLLLANPHFPWMGGMRFYQMQLTIPGQLDVMGAALPGLPMINIGFNQHLAWTHTVDTSKHFTLYRLQ LDPKDPTRYLLDGRSLPLARQTIRVAVKAEDGSLSQVARQVYSSQFGPVVQWPGRLDWDVHAAYSLRDANLENTRVLQQWYQINRADSLAALKGSVEQLQ GIPWVNTLAVDQGGRALYLNQSVVPYVDQQLLDTCSNPQAQGRVVVLDGSRSACQWKVDAQAAQPGIFPARLLPSLEREDFVQNSNDPAWMVNPAQPLTG YSPLVSRNDQPLGMRGRFALQRLQGTARLGVDELQRMVTDDEVYLASLVLPDLLQWCKGASADVQAVCSSLAAWNGKADLDSGIGLVHFQNLFTALAEHP ESWRVAFDPADPQHTPRGLAVEQAAVRKLVHDAALASIKQVSESGVAGEARWGQVQQALDGTPVPGGPQALGVYNAIYSVPHGHGKRLVVSGTSYLQLVS FTDKGPEARGLLAFSQSSEAASAHASDQTKAFAAKQLALIPFTEAQIKADPEYRESVISERDKGAMAQQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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