Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS25355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00300
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 186 562 3.27E-72
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 664 682 1.2E-30
Pfam PF02861 Clp amino terminal domain, pathogenicity island component IPR004176 Clp, repeat (R) domain 30 75 7.6E-4
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 366 562 1.5E-50
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 785 859 0.0048
FunFam G3DSA:3.40.50.300:FF:000025 ATP-dependent Clp protease subunit - - 568 784 7.1E-84
CDD cd19499 RecA-like_ClpB_Hsp104-like - - 577 783 3.66442E-86
Gene3D G3DSA:1.10.8.60 - - - 785 859 4.2E-9
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 726 740 1.2E-30
Gene3D G3DSA:1.10.1780.10 - IPR036628 Clp, N-terminal domain superfamily 1 160 3.2E-32
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 568 784 2.0E-69
NCBIfam TIGR03345 JCVI: type VI secretion system ATPase TssH IPR017729 AAA+ ATPase ClpV1 13 858 0.0
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 693 711 1.2E-30
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 615 779 7.0E-41
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 564 852 7.81E-61
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 615 762 7.7E-11
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 619 637 1.2E-30
Coils Coil Coil - - 521 541 -
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 176 365 1.1E-69
Coils Coil Coil - - 435 455 -
SUPERFAMILY SSF81923 Double Clp-N motif IPR036628 Clp, N-terminal domain superfamily 12 128 8.89E-12
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 367 457 1.1E-29
PANTHER PTHR11638 ATP-DEPENDENT CLP PROTEASE - - 17 855 0.0
CDD cd00009 AAA - - 204 359 6.84328E-17
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 228 338 3.9E-9
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 221 364 2.7E-9
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 787 855 4.1E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.