Pseudomonas chlororaphis YL-1, P637_RS0104535

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis YL-1 contig16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTATGCGTGTAGGTTTTATATTCTTACTCTCTATATTCAATTCTTCTCATTGAGGTTGGGCCTTTTTGTCGGCGCTCATTGCGCAGGCCTACGGGTAGA CTCCTTTAATTTTTTATTGAGTAGCGAGTTGGCCTGGTTCAGGCTACTGCGACGCGAGCACTTGGTAGAGTTCAGCTAACACGCGCGCGTTGAAGAAGTA CACAGTCTTGTCTCATAAGTAAAGACGAAATCAATGAGCGGTTTATTAAGATATTTCTGATGGGTGCTTCGGCCGTCTCTCAATTCAAATTCGAAGGCTG ATCGGTAAGCTACGGCTTCCTTTAGGGGTTCTTCATGGGGCACCTAAAGGAGCTTGCTATTGTTGTCGACCCATTGACTTAGACTTTGAGTGAGAGAGGC TTGGGCTGCCATGGCCGGTGTGATTTGGTCATGGCTGAACCGGGAGAACAATCAAATAGATTGCACTTCTTTTGCCGATCAACGTGAACAAGGAAATCAC
DNA Sequence for Gene
>P637_RS0104535
ATGAAACGCACATCTTTACTGTCCCTGGCAACTTCCAGCTTGATGCTTGCTGCGCTTGTTCCTTCGTTATCTCATGCCACTGATGGCGTGGTTAACTTCT CTGGCAGCATCTCTGACGTGACTTGCAATATCAACGGCCAGGCACCGGGTGAAAACAACATCACCAACGTGGAACTGGGGCGCATCTCTCCTTCGATCTT CAAGGCCATTGGCGATGCTTCTCCGTTCGAGAAGTTCGCGTTGGTGCTGTCCGGCGCGCAATGTGCCAATGGAACCAAGGTCGTCGTTGATTTTGACCAA GTGGGCAACGTCGACTCGGCGACCGGAAACCTCAAGCTGATCGGCGCAGCGCCTGCCACCGGCGTGCAGATCCAGGTGTTCAACGACAATGTCGCTGCTG GCACGAAAATCCCGCTCGGTCAGTCGGAAGCCACGCCACAGGTCGCCACCGTTGCAGCCAACACTGCAACCCTCAAGTTCAAGGCGAACTATGTTGCGAC CGCGGCTAGTGTTGGCGCGGGTTCGGGTAACTCCTTCGTTCGATACACCCTGTCGTATAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGACCAGCGCCCGAGGAGTGATTCATGACGCCGAAAGCGCGTATTTTTTCTTCTTTCGTTCTCGGCGTCATGTTCTTGGGCGTATGTTCTGGAATCGTAC AGGCGTCGGTAGTCATCCAGGGTACTCGGTTGGTTTATCCGTCGGATGCTCGTGAAGTGACAATAAAAGTGAACAATACCGGTGCCTCTGCTGTATTGGT CCAAAGTTGGATTGATGATGGCGATTCAACTAAGGGGCCCGAGGAAATGAAAGTTCCATTTTTGGTGTCCCCGGCGGTGATTCGCCTGGATTCGGACAGT TCAGCTTCACTGCGTGTTTCCTTCACGGGTGAAAAACTTGCAGAAGATCGGGAATCCTTGTTCTGGCTCAATGTACTGGAAACACCTCCACGCAAGGAAG TCGATGAAAATGTCTTGCAGTTTACCTTCAGAACCCGAATCAAAGTGTTCTTTCGACCCAAGAACCTGAAGTCGGATGTGGACTTGGTGGCGAACAAGCT
Amino Acid Sequence
>fimbrial protein
MKRTSLLSLATSSLMLAALVPSLSHATDGVVNFSGSISDVTCNINGQAPGENNITNVELGRISPSIFKAIGDASPFEKFALVLSGAQCANGTKVVVDFDQ VGNVDSATGNLKLIGAAPATGVQIQVFNDNVAAGTKIPLGQSEATPQVATVAANTATLKFKANYVATAASVGAGSGNSFVRYTLSYK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site