Pseudomonas aeruginosa CF_PA39, AX20_RS0122615
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold35, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAGCTGCGACTTGGACAGTGCGCCGACCTTGGTCGCTTCGACATTGCCGCCCTTGAACAGCATCAGGGTCGGAATGCCGCGCACACCGTACTTCGGCG GGGTGTCCTGGTTCTCGTCGATGTTCAGCTTGCAGACCTTCAGCTTGCCCTGATAGTCCTTGGCGACTTCGTCCAGCACCGGCGCGATCATCTTGCACGG ACCGCACCATTCGGCCCAGTAGTCCACCAGCACGGGGCCGTCGGCCTTCAGCACGTCCTGCTCGAAGCTGGCATCAGTAACGTTGACGATATGTTCGCTC ATGAAATCTCTCCGTAGTCGGACGCGAATTGAAACGCGAAAGTGCCGACCATCATATCCCGCCTTGACCCTCGCCGGAAGGCGCAGCCGATTGAGAGTCT CTATCGTTGGTCGGGTGATTCCCGATTGATCGGCTGCCGCATTGGCGACCCTCGCCCTATCGTGGCAGGATGGCGCAGTTTTCCAATGGACTTGCAAAGC
|
|
| DNA Sequence for Gene |
>AX20_RS0122615
ATGCCGCAAAAACCTGCCGAGGCATTCCCGCTGATTGCCGCCCTGGACCTGGGTTCCAACAGCTTCCACCTCTGTCTGGCCAAGGCCAATATCCACGGCG AAGTCCGCATCCTCGAACGGCTGGGCGAGAAGGTTCAGCTGGCCGCCGGCCTCGACGAGGAACGCAATCTCAGCGAAGAGGCCACCCAACGCGGCCTCGA CTGCCTGCGCCGCTTCGCCCAGTTCATCAGCGGCATGCCCCAGGGCTCCGTACGCGTGGTCGCGACCAACGCCTTGCGCGAAGCGCGCAACCGCAGCGAT TTCATCCGTCGTGCGGAAGAGGTCCTCGGCCACCCCGTGGAAGTCATCTCCGGCCGCGAGGAAGCCCGCCTGATCTACCTCGGTGTCGCCAACAGCATGC CCGACAGCGGCGGCCGCCGGCTGGTCAGCGACATCGGCGGCGGCAGCACCGAGTTCATCATCGGCCAGGGTTTCGAGTCCGAGCTGCGGGAAAGCCTACA GATGGGGTGCGTCAGCTACACCCAACGCTACTTCCGCGACGGCAAGATCACCCCGGCCCGCTATGCCCAGGCCTATACCGCCGCACGCCTGGAACTGATG GGCATCGAGAACAGCCTGCGGCGCCTCGGCTGGCAACAGGCGGTCGGCGCCTCCGGCACCATCCGCGCGGTGGCGCTGGCGATCAAGGCCGGCGGCCACG GCAACGGCGAGATCGGCCCGGACGGACTGGCCTGGCTGAAACGCAAGGTGCTCAAGCTCGGCGACGTGGAGAAGCTCGACCTGGACGGGATCAAGCCGGA CCGCCGGACCATCTTCCCGGCCGGACTGGCCATTCTCGAAGCGATCTTCGATGCGCTGGAGCTGGAGCAGATGGTCCACTCCGAGGGAGCCCTGCGCGAA GGCGTTCTCTACGACCTGGTCGGCCGTCACCAGCACGAGGACGTGCGCGAACGCACCATCAGTTCGCTGATGGAGCGCTACCACGTCGATCCCGAGCAGG CCTCGCGGGTGGAAGCCAAGGCCCTCAAGGTACTGGCCGAAGTCGGCGACGCCTGGGAACTGAACGACGAACTGCACCGCGACCTGCTGAGCTGGGGCGC ACGGGTCCATGAGATCGGCCTGGATATCGCCCATTACCACTACCACAAGCACGGCGCCTACCTGATCGAGCACTCCGACCTGGCCGGTTTCTCGCGCCAG GACCAGCAGATGCTGTCGTTACTGGTACGCGGTCACCGCCGCAACATTCCGGCGGACAAACTGGCGGAGTTCGCCGAGGAAGGCGACAAGCTGGTGCGCC TGTGCATCGTGCTGCGCTTCGCGATCCTCTTCCACCACATCCGCGGCACCCAGGAAATGCCCTCGGTGCGCCTGAAGGCCGAGCCCAAGAGCCTTTCGGT GACCTTCCCCGAGGGCTGGCTGGAAGCCAACCCGCTGACCCAGGCCGACTTCGCCCAGGAAGCCGAATGGCTCAAGCGGGTCGGCTACAGCCTCAACGTG CGGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCACCGGGGCGGCCAGTTTTTCCAGCAGGGTCGCCTGGGTATTGCGGGGGTTCTGGTTGCCGGTGGGACTGAGCCGCTGGTAGCTACCGTCTGCCTGCAA TACCCAGGCCTGGGTATTGTCGGTCAGGTACGTTTCCAGTTCCTTCTTGACCCGCTGCACCAGCTTCTTGCCTTCCACCGGGAAGCAGGTCTCCACGCGC ATGTCGAGGTTGCGCTCCATCCAGTCGGCGCTGGAGAGATAGAGCTTCTCGTCGCCACCGTTGAGGAAGTAGTAGATGCGGCTGTGCTCGAGGAAGCGTC CGATGATCGAGCGCACATGGATATTGTGCGAGACCCCCGGGATGCCCGGCCGCAGGCAGCACATGCCGCGCACCACCAACTCGATCTTGACCCCGGCCTG GCTGGCCTTGTACAGGGCGCGGATGACCTTCGGATCGGTCAGCGAGTTGACCTTGGCCATGATGTGCGCCGGCTGGCCGAGCGCCGCCTGGGCCGCCTCG
|
|
| Amino Acid Sequence |
>exopolyphosphatase
MPQKPAEAFPLIAALDLGSNSFHLCLAKANIHGEVRILERLGEKVQLAAGLDEERNLSEEATQRGLDCLRRFAQFISGMPQGSVRVVATNALREARNRSD FIRRAEEVLGHPVEVISGREEARLIYLGVANSMPDSGGRRLVSDIGGGSTEFIIGQGFESELRESLQMGCVSYTQRYFRDGKITPARYAQAYTAARLELM GIENSLRRLGWQQAVGASGTIRAVALAIKAGGHGNGEIGPDGLAWLKRKVLKLGDVEKLDLDGIKPDRRTIFPAGLAILEAIFDALELEQMVHSEGALRE GVLYDLVGRHQHEDVRERTISSLMERYHVDPEQASRVEAKALKVLAEVGDAWELNDELHRDLLSWGARVHEIGLDIAHYHYHKHGAYLIEHSDLAGFSRQ DQQMLSLLVRGHRRNIPADKLAEFAEEGDKLVRLCIVLRFAILFHHIRGTQEMPSVRLKAEPKSLSVTFPEGWLEANPLTQADFAQEAEWLKRVGYSLNV R
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|