Pseudomonas sp. URMO17WK12:I8, F639_RS26985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.1890.10 - - - 44 222 5.6E-8
SUPERFAMILY SSF160355 Bacterial polysaccharide co-polymerase-like - - 222 333 3.4E-14
PANTHER PTHR32309 TYROSINE-PROTEIN KINASE - - 11 427 3.1E-25
SUPERFAMILY SSF160355 Bacterial polysaccharide co-polymerase-like - - 47 219 4.32E-8
Coils Coil Coil - - 224 244 -
Pfam PF02706 Chain length determinant protein IPR003856 Polysaccharide chain length determinant N-terminal domain 15 112 5.4E-13
Gene3D G3DSA:3.30.1890.10 - - - 223 343 1.8E-21
Pfam PF13807 G-rich domain on putative tyrosine kinase IPR032807 Tyrosine kinase, G-rich domain 377 415 1.3E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.