Pseudomonas umsongensis UNC430CL58Col, N519_RS01000000129995
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 1016 | 1036 | 5.2E-13 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 397 | 432 | 8.8E-8 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 548 | 585 | 5.1E-6 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 439 | 475 | 2.0E-7 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 223 | 259 | 3.6E-5 |
| Pfam | PF03527 | RHS protein | IPR001826 | RHS protein | 965 | 1001 | 2.6E-15 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 745 | 769 | - |
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 1039 | 1058 | 5.2E-13 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1167 | 1191 | - |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 198 | 519 | 1.0E-45 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 524 | 559 | 1.7E-7 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 385 | 416 | 1.8E-5 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 338 | 371 | 1.4E-6 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 481 | 518 | 7.2E-7 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 481 | 521 | 2.6E-8 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 624 | 654 | 2.9E-5 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 523 | 552 | 8.0E-4 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 397 | 437 | 5.8E-8 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 439 | 479 | 1.3E-6 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 312 | 349 | 1.4E-7 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 338 | 369 | 1.3E-6 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 418 | 450 | 3.4E-5 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 223 | 259 | 7.1E-8 |
| Pfam | PF15653 | URI fold toxin 2 | IPR028899 | Tox-URI2 domain | 1081 | 1162 | 2.0E-19 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 855 | 877 | 0.009 |
| PANTHER | PTHR32305 | - | - | - | 385 | 592 | 1.6E-39 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 544 | 580 | 8.0E-6 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 668 | 703 | 4.2E-7 |
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 959 | 979 | 5.2E-13 |
| Pfam | PF20148 | Domain of unknown function (DUF6531) | IPR045351 | Domain of unknown function DUF6531 | 31 | 110 | 2.2E-21 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 879 | 911 | 6.0E-7 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 668 | 703 | 5.0E-5 |
| NCBIfam | TIGR03696 | JCVI: RHS repeat-associated core domain | IPR022385 | Rhs repeat-associated core | 992 | 1070 | 7.1E-26 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 521 | 682 | 5.2E-25 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 624 | 656 | 1.6E-5 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 879 | 916 | 1.4E-5 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 683 | 1070 | 7.7E-78 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.