Pseudomonas putida GB-1, PputGB1_1643

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00072	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00421	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppg02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF46894	C-terminal effector domain of the bipartite response regulators	IPR016032	Signal transduction response regulator, C-terminal effector	127	204	1.33E-17
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	4	115	1.9E-27
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	159	175	7.1E-11
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	145	159	7.1E-11
PANTHER	PTHR45566	HTH-TYPE TRANSCRIPTIONAL REGULATOR YHJB-RELATED	-	-	3	199	5.5E-37
SMART	SM00421	luxrmega5	IPR000792	Transcription regulator LuxR, C-terminal	142	199	1.1E-14
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	2	114	1.0E-30
Gene3D	G3DSA:3.40.50.2300	-	-	-	3	205	1.4E-53
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	175	187	7.1E-11
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	147	199	1.4E-17
CDD	cd17535	REC_NarL-like	-	-	4	119	5.47147E-39
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	1	152	1.42E-32
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	147	201	3.08462E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.