Pseudomonas aeruginosa PA14, CIA_05896
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA14 genomic scaffold acUKH-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTTCGCCGGCGAGCGGATCGGCGGTATCGAGGGGCTGGCGATGCTGGTGATCATCAGCGCCGTGGTGCTCATCGGCCTGCCCCAGTGGCGCGCCAGCC GCGCCGCCGCCTGAATGCCTTAAGCGATCCCTAAGGAGGGCTGCGCCATGCTGCGGCGCAGCGCCCGGATGGGCCGGGCTGACGGGGGTACGAAGATGAA AGCGCTGGTCATCGGTGTGGTCCTGGTGTTCCTTGGCGGTTGCGCCAGTCACGTGAGCCCCGGCGGCAAGGCCATCGAGTCGCCGATCAAGGAGTATTTC GGCCAGGACCCCATCGAGCGCCGGGCCTTCGGCGAGAGCGAGAACGGCGCCGAGGCCGAGGATTCGCCACTGCGTTTCCGCCTGACGCCCTGAACGGTCG CCCCGGGCGCCTGACCGGGCGTGCAGAAGTCGTCTCCAGCGTCTTCAATACGGAGTGACGGTCGCCGCCAGGCGGCCCCGTAGCGAAGGCCGGAGGGGCG
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| DNA Sequence for Gene |
>CIA_05896
ATGGAGAGCATGCTGGACAGGCCCGAGCAGGAACTCGTGCTGGTGGTGGACGACACCCCGGACAACCTGCTGCTGATGCGCGAGCTGCTCGAGGAGCAGT ACCGCGTGCGCACCGCCGGCAGCGGCCCGGCCGGGCTGCGGGCGGCCGTCGAAGAGCCGCGCCCGGACCTGATCCTGCTCGACGTGAACATGCCGGGCAT GGACGGCTACGAGGTCTGCCGACGGCTCAAGGCCGATCCGCTGACCCGCGACATCCCGTTGATGTTTCTCACTGCCCGCGCCGATCGCGACGACGAGCAA CAGGGCCTGGCCCTGGGCGCGGTGGATTACCTGGGCAAGCCGGTGAGCCCGCCGATCGTCCTGGCGCGGGTGCGCACCCACCTGCAACTGAAGGCCAATG CCGATTTCCTGCGCGACAAGAGCGAATACCTGGAACTCGAAGTGCGCCGTCGCACGCGCCAGCTGCAACAGTTGCAGGACGCCGTCATCGAAGCCCTGGC AACCCTTGGCGATCTTCGCGACAACCCGCGCAGCCGCCATCTTCCGCGTATCGAGCGCTATGTCAGGCTGCTCGCCGAGCACCTGGCGGCGCAGCGGGCG TTCGCCGACGAGCTGACTCCGGAGGCTGTCGACCTGCTGAGCAAGTCGGCGCTGTTGCATGACATCGGCAAGGTCGCGGTGCCCGACCGGGTCCTGCTCA ACCCCGGGCAACTGGACGCCGCCGACACCGCCCTGCTACAGGGCCATACCCGCGCCGGACGCGACGCCCTGGCCAGCGCCGAGCGGCGGCTCGGCCAGCC TTCCGGGTTCCTCCGCTTCGCCCGGCAGATCGCCTACAGCCATCACGAACGCTGGGATGGCCGGGGCTTTCCGGAGGGCCTGGCGGGCGAGCGGATTCCC CTGGCGGCGCGGATCGTCGCCCTGGCCGACCGCTACGATGAACTGACCAGCCGGCACGCCTACCGGCCGCCGCTGGCACACGCCGAGGCGGTGCTGTTGA TCCAGGCCGGCGCCGACAGTGAATTCGACCCACGGCTGGTGGAGGCCTTCGTCGCCGTGGCCGACGCTTTCGCCGAGGTTGCCCAGCGCTACGCCGACAG CGCCGAGGCGCTGGACGTGGAGATGCAGCGGCTGGAACAGGCGGTGGCGGAAAGCATCGAACTCACCGCGCCACCAGCCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TACGCCGATCGGTGCGCAGTCCGGCGGAAAGCCGGCGCGTCCGGCTGTGCTCGGCACGGCGTTTGCCGTATAACGTCAGACCCTTTGCCTTCCACATTGG CCCCGAGGAACCGCGTAGCACCGATGAAGACACCCAGACGCCTGGAACCGTTGATCGAAGACGGTCTGATCGACGAGGTCGTGCGCCCGCTGATGAGCGG CAAGGAAGCCTCGGTCTATGTGGTGCGTTGCGGCGACAGCCTGCGTTGCGCCAAGGTCTACAAGGAGGCCAACAAGCGCAGCTTCCGCCAGGCCGCCGAG TACCAGGAGGGCCGCAAGGTCCGCAACAGCCGCCAGGCGCGGGCCATGGCCAAGGGCTCGAAGTATGGCCGCCGCGAACAGGAGGAAGCCTGGCAGAATG CCGAAGTGGCGGCCCTGTTCCGTCTCGCCGGGGCCGGTGTGCGGGTGCCGAAGCCCTATGATTTCCTCGATGGCGTGTTGCTGATGGAACTGGTGGCGGA
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| Amino Acid Sequence |
>chemotaxis protein CheY
MESMLDRPEQELVLVVDDTPDNLLLMRELLEEQYRVRTAGSGPAGLRAAVEEPRPDLILLDVNMPGMDGYEVCRRLKADPLTRDIPLMFLTARADRDDEQ QGLALGAVDYLGKPVSPPIVLARVRTHLQLKANADFLRDKSEYLELEVRRRTRQLQQLQDAVIEALATLGDLRDNPRSRHLPRIERYVRLLAEHLAAQRA FADELTPEAVDLLSKSALLHDIGKVAVPDRVLLNPGQLDAADTALLQGHTRAGRDALASAERRLGQPSGFLRFARQIAYSHHERWDGRGFPEGLAGERIP LAARIVALADRYDELTSRHAYRPPLAHAEAVLLIQAGADSEFDPRLVEAFVAVADAFAEVAQRYADSAEALDVEMQRLEQAVAESIELTAPPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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