Pseudomonas putida GB-1, PputGB1_0607
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:1.10.287.950:FF:000001 | Methyl-accepting chemotaxis sensory transducer | - | - | 323 | 653 | 6.4E-78 |
| Coils | Coil | Coil | - | - | 554 | 574 | - |
| SMART | SM00283 | MA_2 | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 391 | 652 | 5.9E-52 |
| PANTHER | PTHR32089 | METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB | - | - | 41 | 652 | 7.3E-83 |
| Gene3D | G3DSA:1.10.287.950 | - | - | - | 323 | 653 | 2.6E-67 |
| SUPERFAMILY | SSF58104 | Methyl-accepting chemotaxis protein (MCP) signaling domain | - | - | 352 | 653 | 1.27E-65 |
| Coils | Coil | Coil | - | - | 459 | 479 | - |
| Pfam | PF00015 | Methyl-accepting chemotaxis protein (MCP) signalling domain | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 465 | 618 | 5.1E-39 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.