Strain | Pseudomonas aeruginosa PA14 genomic scaffold acUKH-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTGGCGTTATCCCTCCAACGCCACGAGGGAGAGCCGAATGAGCTATCGCCTGGCCGCCGATGCCCTGGTCTGGCTGCACCTGGGCTTCATCCTGTTCGTC CTGTTCGGCGGCCTGCTGCCGTTGCGTTGGCCACGCCTGGCCTGGCTGCACCTGCCGGCGGTGGCCTGGGGGTGCGCCGTTGAGTTCCTCGGCCTGCCCT GTCCGCTGACCCCGCTGGAGAATCGTCTGCGCCGGGCCGCCGGGGACGCCGGCTACAGCGGCGGCTTCGTCGAGCACTACCTGTTGCCGCTGATCTATCC CGCCGGCCTGACCCCGGCGGTGCAATGGATCCTTGGCGCCATCGTTCTGCTGGTCAACCTGATCGCCTACCTGTATCTGTGGCATCGCCGCAGTAGCCGC TGAGCCACGGATGCCACGTCATTCCGTATCTGGATAGTGCTGCGCCGGCAGCGAGGCGAATCGTAGGCTGGTCACCCCTGCCCAGCCCGGAGTGTTTCCC
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DNA Sequence for Gene |
>CIA_03457
ATGCATCCCTATTTCAGCCTCGCCGGCCGCGTCGCCCTGGTCACCGGCGGCAGCCGCGGCATCGGCCAGATGATCGCCCAGGGTCTTCTCGAAGCCGGCG CCCGCGTCTTCATCTGCGCACGTGACGCAGAGGCCTGCGCCGACACCGCCACACACCTCTCGGCCTACGGCGATTGCCAGGCGATCCCTGCCGACCTTTC CAGCGAAGCCGGTGCCCGGCGCCTGGCGCAGGCGCTCGGCGAACTCAGCGCGCGGCTGGATATCCTGGTGAACAACGCCGGCACCAGTTGGGGCGCAGCG CTGGAAAGCTATCCGGTGTCCGGCTGGGAAAAGGTCATGCAGCTCAATGTCACCTCGGTGTTTTCCTGCATCCAGCAACTGCTGCCGCTGCTGCGCCGCT CGGCCAGCGCGGAAAATCCGGCGCGAGTGATCAACATCGGCTCGGTGGCGGGCATCAGCGCCATGGGCGAACAAGCCTATGCCTACGGGCCGAGCAAGGC CGCGCTGCATCAACTGTCGCGGATGCTGGCGAAGGAACTGGTCGGCGAGCACATCAATGTCAACGTGATCGCTCCCGGACGCTTCCCGAGCCGCATGACC CGTCACATCGCCAATGACCCGCAGGCACTGGAGGCGGACAGCGCGTCGATTCCCATGGGCCGCTGGGGTCGCCCGGAGGAGATGGCGGCGCTGGCGATCA GCCTGGCCGGCACCGCCGGCGCCTACATGACCGGCAACGTGATCCCCATCGACGGCGGTTTTCATCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCCGCCAATCCGGGTAACATGACGCCCCCGACCGCTCGCCTCGTCCCGCCATGACCCACAGCGTTTCTCCCATCGGCTACATCCGCTCCTGCTTCATG GAGAAGTTCGCCATCCCGCGCCAGCCGCTGCTCGCGCCGGCGGCGCGGGGGACCCTGGAACTGCTGCCGCCGTTCGACCAGGTGGAAGCGCTGGAAGGCC TGGAGCAGGTCAGCCATGTCTGGCTGCTGTTCCTCTTCCACCAGGCCCTGGAAGACAAGCCGCGACTGAAGGTGCGCCCGCCGCGCCTGGGCGGCAACCG CTCGCTGGGAGTCTTCGCCACCCGCGCCACCCATCGGCCGAACGGCATCGGCCAGTCGGTGGTGCGCCTGGAGGGCTTCGAAGCGGGGCGCCTGTGGCTG TCCGGAATCGACCTGCTCGACGGCACCCCGGTACTCGATATCAAGCCCTACGTACCCTACGCCGACGCCGTGGCCGACGCCCGCAACGCCATCGCCGACG
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Amino Acid Sequence |
>3-oxoacyl-ACP reductase
MHPYFSLAGRVALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATHLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAA LESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMT RHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGFHL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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