Pseudomonas aeruginosa PA14, CIA_03347

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa PA14 genomic scaffold acUKH-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCGTCGAGCGCGCCGACCTGGCCGTGTCGAAGCACCAGTTCGACATCGTCAGCACCAGGCTGCTGACCCAGTTCTCCAACAACATCCGCAACAACTTCG GCTTCCTCAACCGCGCCGACGAGAGCGGTATTGGCAAGCGCGACAAGCTGTTCGTCCAGGAAGGCCGCAAGGTGTTCAAGGATGTCTGCCCGATGGTCGC CGAGCTGATCGGCGAGCACCTGGCGGCCAATGAAATCCAGGTCGCCGAGGTCAAGCGCTTCTGGCTGCACCAGGCCAACCTGAACATGAACCTGCTGATC ACCCGCAAGCTGCTCGGCCGCGACGCCGAGGCGCACGAGGCGCCGGTGATCCTCGACAGCTACGCGAATACCAGTTCCGCCGGCTCGGTGATCGCCCTGC ACAAGCACCAGGATGACCTGCCCAGCGGCGCCATCGGGGTGCTCAGCTCGTTCGGCGCCGGTTACTCGATCGGTAGCGTGATCCTGCGTAAACACTGATC
DNA Sequence for Gene
>CIA_03347
GTGGCGGCGCCTACCGACGCCGAGCTGCTGCCGCGCCTGCTGGCCGGCGAGCAGCGAGCCTTTCGCGAGCTGGTTGGCGCCTACCAGGGCGCCATGCGGG CCGTGGCCTGGGCGATCATCGGCAGATCGCATACCGAGGAAGTGGTGCAGGACGCCTGGCTTGCGGCGGTTCGCGGGCTGGACGGGTTCCAGGGGCGTTC GAGCCTGAAGACCTGGCTGCTGACCATCACCGCCAATACCGCCAAGAGCCGCTTGCGCCAGGTTCGCCGGGAAGTTTTCCTCGACGACCTGCCGGGGCCC CATGGTACGGTGGATGACCAGCGCTTTGCCGCCGACGGTCACTGGAGCCAGCCGCCGCACGCCTGGCACGAGGATTCGCCGGAAGCCCTGCTCACCGAGG GCGAACTGCGCGATTGCCTGGACAAGACCCTCAACGGTCTGTCCGAACTGCAGCGCAGCGTGCTGACCCTGCGCGAACGCCAGGGCTTGGAGCTGGAGGA AATCCGTGATCTCCTGGATATCACGCTTTCCAATGTCCGGGTGCTGCTGCATCGCGCCCGCCTGAAGGTCTTCGCCACCCTGGAGCATTTCGAGGAGACC GGCCAATGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTGCAAGGAACTGGTCGCCCGGTCCAGCGACTTTCTCGATGGGCAACTGGACTTCCGCGGACAACTGGCGGTGCGCAGCCACCTGCTCATGTGCGGGCA TTGCCGGCGCTTCATCCGCCAGATGCGCCTGACCCAGGCGACCGTGCGCCATCTGCCGGAAGGGCAGGGGCCGGAACTCGACCGCCTGGCCGCGCATCTC TCCGAGTTGCGCAAGGACGCCGCGCGGCGCTGAGCCGGGGTACCCTCGACACCAAGCCGCCGCCCGCGATTCGTGGGCGGCGGCTTTTTCGTTTCCGCTA TCCGGCGTGGGCGAACCGAACCCGGCCTGGCGTGGGCGGCTCTCTCTTCCGCGTGACGAGGTCGAGGAGTGTGGCTGGGCTTGGCGGATATCGCTGCGCG ATATGCGCCCTACGGAGGGGCGGCAATCCGTTTCGCTGGGCGGGCATCCGAAGTCGAGGAGAACGCCTGGGACCTGGCGGATATCGCCGCCCGATATTTC
Amino Acid Sequence
>RNA polymerase subunit sigma-24
MAAPTDAELLPRLLAGEQRAFRELVGAYQGAMRAVAWAIIGRSHTEEVVQDAWLAAVRGLDGFQGRSSLKTWLLTITANTAKSRLRQVRREVFLDDLPGP HGTVDDQRFAADGHWSQPPHAWHEDSPEALLTEGELRDCLDKTLNGLSELQRSVLTLRERQGLELEEIRDLLDITLSNVRVLLHRARLKVFATLEHFEET GQC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site