Pseudomonas aeruginosa PA14, CIA_03196

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa PA14 genomic scaffold acUKH-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCGTTCTCCAACTACGCGTCCCTGCACGAGAAAGGCAGCATCGTCCGCGGTACCGTGAAGGAAGTCGACGCCAAAGGCGCTGTCATCAGCCTGGGCGAC GACATCGAAGGTATCCTGAAGGCTTCCGAAATCAGCCGTGACCGCGTCGAAGACGCGCGCAACGTCCTGAAGGAAGGCGAGGAAGTCGAAGCCAAGATCA TCAGCATCGACCGCAAGAGCCGCGTCATCAGCCTCTCCGTCAAGTCCAAGGACGTCGATGACGAGAAGGACGCAATGAAAGAACTGCGTAAGCAGGAAGT AGAAAGCGCTGGTCCGACCACCATCGGTGATCTGATCCGTGCTCAGATGGAGAATCAGGGCTAAGTCTCTGATCCATCATGAAAAAGGGCGGCCTAGGCC GCCCTTTTTCGTTTTCCCCTTCTTGGACCTGTTCAAAGACTGATCAGCATGCTAAAAGAGACCTGAGCTGATCTAGCCGCTTGAAAAAGAAGGGAAAACC
DNA Sequence for Gene
>CIA_03196
ATGACCAAGTCGGAGTTGATCGAACGGATCGTTACCCATCAGGGGCAACTGTCCGCGAAGGATGTCGAGTTGGCAATCAAGACCATGCTGGAGCAAATGT CCCAAGCCCTGGCGACTGGGGACCGGATCGAGATCCGTGGCTTCGGCAGCTTTTCCTTGCACTACCGCGCCCCGCGCGTCGGTCGCAACCCCAAGACCGG GGAGTCGGTACGCCTCGACGGCAAGTTCGTGCCGCACTTCAAGCCGGGCAAGGAGTTGCGGGATCGGGTCAACGAGCCGGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAGCGGTTCGATCAGCGTTATAGAGGGATTTCCATGCAATGGTTCAGGCGATCTGCCGCTATAGCGGTTCTGCTAGTGGTATCTATCGTAGTTGTGGTTT TCGTTCTGGAGAATCAGGGGCTGGTTCAGGTGGCCTTCCTCGGTCTTCAGTCTCCTCAGTGGCCCCTGGCCGTCTATCTCATCACAGCCTTTGTCCTTGG TGGACTCCTGGGGTTGGCCATCCAACTGCCTTCCCTGGCTATCTCGCGTGCACGAGCCAGTGGCCTGCGCGCGGAGTTGGAGCAGGCTCGTAAAGAGGTT GACAGCTTGCGGGTGCCTTCCAGTTCATCCTGACTGCTTTTCTATTTCGGTTCGAGTAAGGCATTTGGAGGCGGGAGCGGTGAACGAAAGCAACTAATCA TTGTTCGCTCTGTCTACTGAGATTCTTCACTTAAAAGGCGAAGAGGCAGCATGCTCGTACCCCCGGGCTCATGGGGCGACATCAGTTTGTAATCTAAAGA
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGQLSAKDVELAIKTMLEQMSQALATGDRIEIRGFGSFSLHYRAPRVGRNPKTGESVRLDGKFVPHFKPGKELRDRVNEPE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site