Pseudomonas aeruginosa E2, P998_05007
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa E2 genomic scaffold adgft-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGTGGCCTGCATCGACCTGCCCACCTGCCATGGCGAGTGGTGGCCGCGGATGGACTTCGCCAACGGCTTCCACCTGACCCAGCACATCGGCCCCAAC TACCTCGGCGGCCAGCTCGACAGCGACGCGCGCACGGCGATCCACATGACCCACCGGATCGGCGCGCTGTGCGTGACCCTGGTCCTCCTGCTGCTCGCCT GGCGCCTGCAGCGCAGCGGCCTGGTCTGGCCGACCGCGCTGATGCTGCTCGGCCTGTCGCTGCAGATCGGCCTGGGCATCAGCAACGTGCTGCTGCACCT GCCGCTGCCGGTGGCGGTGGCGCACAACGGCGGTGGCGCCCTGCTGCTGCTCAGCCTGGTGCTGGTCAACTATCGCCTGCGCGCGCCGGCCAGCGTCCGC GCGCCGGCACCGTCGCCGCAGCGCGTGCGCCGCACGCTGCCGCCGGCGCAAGGTTCGCGGCTGAAGGCCGCCTGACAGACAGAAGGATGGAGGTAAGGAT
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| DNA Sequence for Gene |
>P998_05007
ATGGCCACCGTCATCGATCGCCACAGCCAGCCGACCTGGCGCGACTTCCTCGAACTGACCAAGCCCAAGGTCGTGGTGCTGATGCTGATCACCTCGCTGA TCGGCATGCTGCTCGCCACCAAGGCGCCGCTGGATGGCTTCGTGCCCTGGCAGGTGCTGATCTTCGGCAACCTCGGCATCGGCCTTTGTGCCGGCGCGGC GGCGGCGGTCAACCATGTGGTGGACCGGCGCATCGACTCGATCATGGCGCGGACCCACAAGCGGCCGCTGGCCGAGGGTCGGGTGTCGCCGAGCATGGCG CTGGGCTTCGCGCTGCTCCTGGCGCTGGCCGGGATGGCCGTGCTGCTGGCCTTCACCAACCCGCTGACGGCCTGGCTGACCCTCGCCTCGCTGCTCGGCT ACGCGGCGCTCTACACCGGCTTCCTGAAGCGCGCCACGCCGCAGAACATCGTCATCGGCGGGCTCGCCGGGGCGGCGCCGCCGCTGCTCGGCTGGGTCGC CATCACCGGCCACCTGAGCGCCGAGCCGCTGTTGCTGGTATTGATCATCTTCGCCTGGACCCCACCGCACTTCTGGGCGCTATGCATCCACCGCAAGGAC GAATACGCCAAGGCCGACATCCCGATGCTGCCGGTGACCCACGGCGAGCGCTACACCAAGCTGCACATCCTGCTCTATACCCTGGTGCTGTTCGCGGTGA GCCTGATGCCGTTCGTCATCCACATGAGCGGGCTGGTCTACCTGCTCTGCGCCCTGGCCCTGGGCGCGCGCTTCCTCGACTGGGCCTGGGCGCTCTACTG TGACAGCCGGCCACATGCGGCGATAAAGACCTTCAAGTACTCTATCGTCTACCTGCTCCTGCTGTTCATGGCGCTGCTGGTGGACCACTATCTGCCGCTG AAGCTGCTTCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCACTCTAGAGCCTTGCCCACCCATGACTCGAGTCAACAAGACCGTCCTCGTCCTCGTCGCCCTGGTCGCCCTGGTCCTCGGCCTCACCGTGCACAAG GTGCTCACCGCCCAGCGCCAGGCCGATCCCACCGTGCTGCTCGACGCCGGCATCGTGATCCTGCCGCAGACGCGCAAGGTGCCGGCGCTGGAGTTCACCA ACCAGGACGGCCAGGCGGTCAGCACTGCCAGTCTCAAGGGTCGCTGGCACCTGCTGTTCTTCGGCTACACCTTCTGCCCCGATGTCTGCCCGACCACCCT CGCCCAGCTCCGCGAATTGCAGGGCAAGCTGCCGCAGGAGGTGCGCGACGACCTGCAGGTGGTATTCGTCAGCGTCGATCCGAACCGCGACACGCCGCAG CAGATCAAGCAATACCTGGGCTACTTCAACGCCGGCTTCCAGGGGCTCACCGGCACTCCGGAGAACATCCAGAAGCTGGCCAACGCCATGAGCATCCCCT
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| Amino Acid Sequence |
>protoheme IX farnesyltransferase
MATVIDRHSQPTWRDFLELTKPKVVVLMLITSLIGMLLATKAPLDGFVPWQVLIFGNLGIGLCAGAAAAVNHVVDRRIDSIMARTHKRPLAEGRVSPSMA LGFALLLALAGMAVLLAFTNPLTAWLTLASLLGYAALYTGFLKRATPQNIVIGGLAGAAPPLLGWVAITGHLSAEPLLLVLIIFAWTPPHFWALCIHRKD EYAKADIPMLPVTHGERYTKLHILLYTLVLFAVSLMPFVIHMSGLVYLLCALALGARFLDWAWALYCDSRPHAAIKTFKYSIVYLLLLFMALLVDHYLPL KLLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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