Strain | Pseudomonas aeruginosa E2 genomic scaffold adgft-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCCTACGTCGGCGAGAACGCCCTGTTCGAGCAACAACTGCTCAGTGGCGAGCTGGAAGTCGAACTGACCCCGCAAGGCTCGCTGGCCGAGAAGATCCGC GCCGGCGGCGCCGGCATCCCGGCCTTCTTCACCGCCACCGGCTACGGCACCCCGGTCGCCGAGGGCAAGGAGGCGCGCGAGTTCAATGGCCGCCACTACA TCCTCGAACCGGCCATCACCGGCGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCATTTCGGCAACGTCGTCTATCGCCACACCGCGCAGAACTTCAA CCCGCTGGTCGCCACCGCCGGGCGCATCACGGTGGTCGAGGTGGAGGAGATCGTCGAGCCCGGCGAACTGGACCCGACGCAGATCCACACCCCCGGCATC TACGTCGACCGGATCATCCAGGGTCGCTTCGAGAAACGCATCGAGAAACGCACGCTGCGCGCCTGACGGCGGCCGCTACAACGACAAGAGGTTTCCCCAG
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DNA Sequence for Gene |
>P998_02394
ATGGCACTTACCCGCGAACAGATGGCGCAGCGCGTGGCGCGCGAATTGAAGGACGGCTACTACGTCAACCTCGGCATCGGCATCCCGACCCTGGTGGCCA ACTACGTGCCGGAAGGCATCGACGTCATGCTCCAGTCGGAGAACGGCCTGCTCGGCATGGGCGCGTTCCCCAGCGAGGCGGAAGTCGACGCCGACATGAT CAACGCCGGCAAGCAGACCGTGACCGCCCGCGTCGGCGCGTCGATCTTCGACTCGGCGCAGTCCTTCGCCATGATCCGTGGCGGCCACGTCGACCTCACC GTGCTCGGTGCCTTCGAGGTGGACGTGCGCGGCAACATCGCCTCCTGGATGATCCCCGGCAAGCTGGTCAAGGGCATGGGCGGCGCCATGGACCTGGTGG CCGGCGCCGAGAACATCATCGTCACCATGACCCACGCCTCCAAGGACGGCGAGTCCAAGCTGCTGCCGTACTGCACCCTGCCGCTGACCGGTTGCGGCTG CATTCGCAAGGTGCTCACCGACCTGGCCTACCTGGAGATCGAGGACGGCGCCTTCATCCTCCGCGAGCGCGCCCCCGGGGTCAGCGTCGAGGAGATCGTG GCGAAGACCGCCGGCAAGCTGATCGTCCCCGAGCACGTGCCGGAAATGAGTTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCGCGGCCCGCGCGGCCGGCGCCTCCACGCAAGGCGCCGGCCGCGCGGACCGTCCTTTCCAGAGGGCGTAGGATAGGAGCCTGTCGCACCGCCTACGTC CACCCGCAGCGATTCGGCCCGGCCACGGGCGAATCCAGGAGAACCATCCATGCAAGACGTCGTCATCGTCGCCGCTACCCGTACCGCCGTCGGCAGCTTC CAGGGCTCGCTGGCCGGCATTCCCGCCCCCGAGCTGGGCGCCGCGGTGATCCGCCGCCTGCTCGAACAGACCGGTCTCGATGCCGGCCAGGTCGACGAAG TGATTCTCGGCCAGGTGCTCACCGCCGGTTCCGGGCAGAACCCGGCGCGCCAGGCGGCGATCAAGGCCGGCCTGCCGGTCGGCGTGCCGGCCATGACCCT GAACAAGGTCTGCGGCTCCGGCCTCAAGGCCCTGCACCTGGGCGCCCAGGCGATCCGCTGCGGCGACGCCGAGGTGATCGTCGCCGGCGGCCAGGAGAAC
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Amino Acid Sequence |
>succinyl-CoA:3-ketoacid-CoA transferase
MALTREQMAQRVARELKDGYYVNLGIGIPTLVANYVPEGIDVMLQSENGLLGMGAFPSEAEVDADMINAGKQTVTARVGASIFDSAQSFAMIRGGHVDLT VLGAFEVDVRGNIASWMIPGKLVKGMGGAMDLVAGAENIIVTMTHASKDGESKLLPYCTLPLTGCGCIRKVLTDLAYLEIEDGAFILRERAPGVSVEEIV AKTAGKLIVPEHVPEMSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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