Pseudomonas fluorescens SBW25, PFLU6025 (clpB2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCTGCATTACAGCGGCCACCTCTCGGCGCAAACCCGCTACCCGGACGGCTTGAAAGCCATTCTCGGCGAGTACTTCGGCCTGCCGGTGGCGATCGAA GAGTACGTCGGCCAATGGCTCGGGCTGCCCGAACGCAGCCGCGTGGGCGTGAGCGCCAACCGCCTCGGCGTGGACTTTTGCCTGGGCAGCTTCGTGTGGG ATCGCCAGCACAAATTCCGTATCCGCCTGGGCCCCCTCACGCTGGATGACTACATGGGCATGCTGCCCGGCCACCAACCGTTCAACGAGCTGGTGGCGTG GGTGGCCGAGTACCTGGGCCATGAACTGGACTGGGACTTGAACCTGGTTCTGCAACAAGCCGAAGTGCCAGCGCTGCAACTCAACGGCCAGTTCCGCCTG GGCTTCAACACCTGGCTCGGTAAACCCGAGCATGACGCCAACGACCTAATCCTGGCCCGGCACTACGCCGACCACGCCACCACCTCAAGGAATCCAGAGC
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| DNA Sequence for Gene |
>PFLU6025
|clpB2
ATGGGTGAAATCAGTCGCGCCGCACTGTTCGGCAAACTCAACAGCGTGGCCTACAAGGCCATCGAAGCCGCCACGGTGTTCTGCAAACTGCGGGGCAACC CGTATGTGGAGCTTGCCCACTGGTTTCACCAGTTGCTGCAACTGCAGGACTCGGACCTGCACCGCATCATCCGCCAGTTCAACGTCGAGCCGGCGCGCCT GGCCCGCGACCTGACTGAAGCCCTGGACCGCCTGCCACGCGGCTCGACCTCGATCACCGACCTGTCCTCCCATGTGGAAGAAGCGGTGGAGCGCGGCTGG GTCTACGGCAGCCTGATGTTCGGCGAAAGCCAAGTACGCACCGGTTATCTGGTGCTCGGCATTCTCAAGACCCCGAGCCTGCGCCATGCGCTGCTGGGCT TGTCTTCCGAGTTCGACAAGATCAAGGCCGAGGCCCTGAGCGAGCGCTTTGATGAATACGTGGGCGACTCGCCGGAAAACGCGCTGAGCGCCAGCGACGG TTTCAACGCCGGCGCCGTGCCGGGCGAAGCCAGCGGTGCCATGGCGCCCAGTGCGATGGGCAAACAGGAAGCGCTCAAGCGCTTCACCGTTGACCTGACC GAACAGGCCCGCAGCGGCAAGCTCGACCCGATCGTGGGTCGTGATGAGGAGATCCGCCAACTGGTCGACATCCTCATGCGCCGCCGCCAGAACAACCCGA TCCTCACCGGTGAAGCCGGGGTGGGCAAGACCGCCGTGGTCGAAGGTTTCGCCCTGCGTATCGTCGCCGGTGACGTGCCACCCGCGCTCAAAGATGTGGA ACTGCGCAGCCTCGACGTGGGCCTGCTGCAAGCCGGCGCCAGCATGAAAGGCGAATTCGAACAGCGCCTGCGCCAGGTCATTGAAGACGTCCAGGCCTCA CCCAAGCCGATCATCCTGTTTATCGACGAAGCCCACACCCTGGTGGGTGCCGGTGGCGCCGCCGGCACCGGTGACGCAGCCAACCTGCTCAAGCCTGCAT TGGCGCGTGGCACCCTGCGTACTGTGGCCGCCACCACCTGGGCCGAGTACAAGAAGCACATCGAGAAAGACCCGGCCCTGACGCGCCGTTTCCAGGTGGT GCAAGTCGCCGAACCGTCGGAAGACAAAGCGCTGCTGATGATGCGTGGCGTGGCGTCGACCATGGAAAAACACCACCAGGTGCAGATCCTCGACGAAGCC CTGGAAGCCTCGGTGAAGCTGTCCCACCGCTACATCCCGGCGCGCCAGTTGCCGGACAAATCCGTAAGCCTGCTGGACACCGCTTGCGCCCGCGTCGCCA TCAGCCTGCACGCGGTGCCGGCCGAAGTGGACGACAGCCGCCGCCGCATCGAAGCCCTGGAAACCGAGCTGCAGATCATCGCTCGCGAGCATGCCATTGG TATCGCGATTGGCGCGCGTCAAACCAATAGCGAAGCACTGTTGAGCGCTGAACGTGAGCGCCTGGCGACGCTGGAAAGCCGCTGGGCCGAAGAGAAAGCG CTGGTGGACGAACTGCTCGCTACCCGCGCGACCTTGCGCGAAAAAGCCGGCGCCGTAGACAGTGGCGACGACGCTTTGCGCGAGCAACTGGTCGACCTGC AACAACGCCTCAGCGCGCTGCAAGGTGAAACCCCGCTGATCCTGCCGACGGTGGACTACCAGGCCGTGGCCTCGGTGGTCGCCGACTGGACCGGCATCCC GGTGGGCCGCATGGCGCGCAATGAGCTGGAGACGGTGCTCAACCTCGACCAGCACCTGAAGAAACGCATCATCGGCCAGGACCACGCCCTGCAGATGATC GCCAAGCGCATCCAGACGTCCCGCGCCGGTCTCGACAACCCGAGCAAGCCGATTGGCGTGTTCATGCTGGCCGGCACCTCGGGCGTGGGCAAGACCGAAA CCGCCCTGGCCCTGGCCGAAGCCATGTACGGCGGCGAGCAGAACGTCATCACCATCAACATGAGCGAATTCCAGGAAGCCCACACGGTGTCGACCCTCAA GGGCGCGCCTCCGGGCTATATCGGCTACGGCGAAGGCGGCGTGCTGACCGAAGCCGTGCGGCGCAAACCCTACAGCGTGGTACTGCTGGACGAGGTGGAG AAAGCCCACCCGGACGTGCATGAAATCTTCTTCCAGGTGTTCGACAAGGGCGTGATGGAAGACGGCGAAGGCCGGGTGATCGACTTCAAGAACACCCTGA TCCTGCTGACCACCAACGCCGGTACCGAGCTGATTTCCCAGGTGTGCAAAGACCCGGCGAACATCCCTGAGCCGGAAGAAATCGCCAAGGCCCTGCGCCA GCCGCTGCTGGAGATCTTTCCGCCGGCACTGCTCGGCCGCCTAGTGACCATTCCGTACTACCCGCTGAGCGATGAGATGCTCAAGGCGATCACCCGCCTG CAACTGGGTCGCATCAAGAAGCGCGTGGAGACGACCCACAAGGTTGCCTTCGACTACGACGACGCGGTGGTCGACCTGATCGTCTCGCGTTGCACCGAAA CCGAAAGCGGCGGGCGCATGATCGACACCATTCTTACCAACAGCCTGCTGCCGGACATGAGCCGTGAGTTCCTCACGCGCATGCTCGAAGGCAAGGCGAT GGCGGGTGTACGCATCAGCAGCCGGGATAATGAATTGCACTACGACTTCAGCGACGCAGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGACGGAACACAATCAAAATGTGGGAGGGGGCTTGCCCCCGATAGCAGTGTGTCAGTTGATGCATTCGGTGACTGATTCACCGCCATCGGGGGCAAGT CCCCTCCCACACTTGAACCGGTTCCTTCAGTTACTTAGTCATTTACGGGACAACCGATGCTTTTTAACCAAGCCTCACGCCTGGCCAAGATCACCAGCCC CCTGGGGCCGGATGTGCTGCTGCTCAATGAAATGGGCGGCGGCGAAGAGCTGGGGCGGCTGTTCAACTATGAGCTGCAACTGACGTCCCTGGACGCCAAC ATCGACCTCAACCAGTTGCTCGGCAAACCCATGAGCGTGGGCCTGCAACTGGCGGACGGCGGTGAGCGGCACTTCCACGGTATCGTCGCGCGCTGCAGCC AGAACATCGACCAGGGCCAGTTCGCCAGTTACCAGGTGACGTTGCGCCCGTGGCTGTGGCTGCTCAGCCGTACCTCGGACTGCCGGATTTTCCAGAACCT
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| Amino Acid Sequence |
>chaperone
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQFNVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGW VYGSLMFGESQVRTGYLVLGILKTPSLRHALLGLSSEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGAVPGEASGAMAPSAMGKQEALKRFTVDLT EQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEA LEASVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNSEALLSAERERLATLESRWAEEKA LVDELLATRATLREKAGAVDSGDDALREQLVDLQQRLSALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMI AKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVE KAHPDVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELISQVCKDPANIPEPEEIAKALRQPLLEIFPPALLGRLVTIPYYPLSDEMLKAITRL QLGRIKKRVETTHKVAFDYDDAVVDLIVSRCTETESGGRMIDTILTNSLLPDMSREFLTRMLEGKAMAGVRISSRDNELHYDFSDAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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