Pseudomonas fluorescens SBW25, PFLU5678

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5678
Name
Replicon chromosome
Genomic location 6221526 - 6222629 (- strand)

Cross-References

RefSeq YP_002875171.1
GI 229593052
Entrez 7817208
INSDC CAY53009.1
UniParc UPI00019DAE9A
UniProtKB Acc C3K3C5
UniProtKB ID C3K3C5_PSEFS
UniRef100 UniRef100_A0A0C5JSF4
UniRef50 UniRef50_Q4K4L5
UniRef90 UniRef90_Q4K4L5

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 5.92
Kyte-Doolittle Hydrophobicity Value -0.135
Molecular Weight (kDa) 41.0
Isoelectric Point (pI) 8.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 429 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001883 (1422 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5678

Human Homologs

References

No references are associated with this feature.