Pseudomonas fluorescens SBW25, PFLU5398

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00072	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00082	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00082	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	530	646	2.0E-27
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	630	643	9.1E-11
Pfam	PF07695	7TM diverse intracellular signalling	IPR011623	7TM-DISM receptor, extracellular domain, type 1	184	386	4.7E-54
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	530	643	2.0E-19
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	472	642	1.57E-34
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	606	624	9.1E-11
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	418	483	1.7E-16
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	662	778	1.28E-22
CDD	cd17546	REC_hyHK_CKI1_RcsC-like	-	-	666	774	2.42357E-26
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	419	483	1.1E-13
Gene3D	G3DSA:2.60.40.2380	-	-	-	29	179	1.0E-41
Pfam	PF07696	7TMR-DISM extracellular 2	IPR011622	7TM-DISM receptor, extracellular domain, type 2	32	171	9.2E-42
CDD	cd16922	HATPase_EvgS-ArcB-TorS-like	-	-	545	638	7.91856E-37
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	416	478	6.24503E-13
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	666	773	2.2E-11
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	589	599	9.1E-11
FunFam	G3DSA:3.30.565.10:FF:000010	Sensor histidine kinase RcsC	-	-	482	647	7.9E-43
PANTHER	PTHR45339	HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J	-	-	650	780	1.9E-95
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	482	646	3.7E-39
Gene3D	G3DSA:1.10.287.130	-	-	-	383	481	7.4E-19
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	664	774	7.4E-17
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	571	585	9.1E-11
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	404	484	8.63E-17
Gene3D	G3DSA:3.40.50.2300	-	-	-	665	792	4.3E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.