Pseudomonas fluorescens SBW25, PFLU5064 (hscA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CGCTACCGAGAACTGGCGCGTGGGGTGCATCCGGACCGCTTCGCTGACGCTTCCGAGCGTGAGCAACGCCTGGCGCTGGAGAAATCGGCCAGCCTCAATG AGGCCTATCAGACGCTGAAAAACCCGCCCAAACGTGCGCGCTATCTGCTCGCAATGAATGGTGGCGAGGTGCCGATTGAAGTCACGGTGCACGACCCGGA CTTCCTGATGCAGCAGATGCAGTGGCGCGAAGAACTCGAAGACTTGCAGGACGAAGCCGATGTGGCGGGTGTCGCAGTCTTCAAGCGTCGTCTGAAAACG GCCCAGGATGAGCTCAACGAAAGCTTCGCAGCTTGTTGGAATGATGCAGCGCAACGCGAACAGGCCGAACGCCTGATGCGGCGCATGCAGTTCCTCGACA AGCTCACCTACGAAGTGCGCCAGCTAGAAGAGCGCCTCGACGATTAACCCAGTGTGCTGCCCGTGATGCACGCCTGATAGACAGATAAGACCTGATTACC
DNA Sequence for Gene
>PFLU5064 |hscA
ATGGCATTACTGCAAATCGCCGAACCCGGCCAAAGCCCTCAACCGCACCAGCGTCGCCTGGCGGTGGGGATTGACCTGGGCACCACCAATTCCCTGGTTG CTGCCTTGCGCAGCGGCCTGTCCGAGCCGCTGCCCGACGCTGATGGCCAAGTGATTCTGCCGTCTGCCGTGCGTTATCACGCTGATCGCACCGAAGTGGG CGAGTCGGCCAAGTTGGCGGCCTCTGCCGATCCTTTGAACACCGTGCTGTCGGTCAAGCGCTTGATGGGTCGTGGTCTGTCCGACGTCAAGCAACTGGGC GACCAGCTGCCGTACCGCTTTGTCGGCGGTGAATCCCATATGCCGTTTATCGACACCGTCCAGGGCCCGAAAAGCCCCGTGGAAGTGTCGGCCGATATCC TCAAGGTGCTGCGCCAGCGTGCAGAAACCACCCTGGGCGGCGAATTGGTGGGGGCGGTGATCACCGTTCCGGCGTATTTCGATGACGCCCAGCGCCAGGC GACCAAGGACGCGGCGAAACTCGCCGGCCTGAACGTGTTGCGCCTGCTCAACGAACCGACCGCTGCTGCGGTGGCTTATGGCCTGGACCAGCACGCCGAA GGCCTGGTCGCGATTTACGATCTGGGCGGCGGTACCTTTGATATTTCGATCCTGCGCCTGACCGGCGGTGTCTTTGAAGTGCTGGCCACCGGCGGTGACA GCGCCTTGGGTGGCGATGACTTCGATCATACCGTCGCGGGCTGGATCATCAGCAGTGCCGGCTTGTCGGCCGACCTGGACCCAGGCGCGCAGCGTAATCT GCTGCAAACCGCCTGTGCCGCCAAAGAAGCGCTGACGGATGCTGCAACTGTTGAAGTGTCCTACGGCACCTGGTCGGCCCAGCTGACTCGCGAAGCCTTC GATGCGTTGATCGAACCGATGGTCGCTCGCAGCCTGAAAGCTTGCCGCCGTGCCGTGCGTGATTCCGGTGTTGAGCTGGAAGACGTCGGTGCCGTGGTCA TGGTCGGCGGTTCCACCCGCGTTCCGCGCGTTCGTGATGCCGTGGCTGAGGCCTTTGGTCGCCAGCCGCTGACTGAAATAGACCCGGATCAAGTGGTCGC CATCGGTGCCGCCATCCAGGCCGATACCTTGGCCGGTAACAAGCGTGATGGTGGCGAACTGCTGTTGCTCGACGTGATTCCGCTGTCTCTGGGGCTGGAA ACCATGGGTGGCTTGATGGAGAAGGTGATTCCACGCAACACCACCATCCCCGTCGCCCGCGCCCAGGATTTCACCACGTACAAAGATGGTCAGACGGCCA TGATGATTCATGTGCTGCAAGGCGAGCGCGAGCTGATCAGCGACTGCCGCTCCTTGGCGCGCTTTGAATTGCGCGGCATTCCGGCGATGGTGGCCGGTGC CGCGAAGATCCGCGTGACCTACCAGGTCGACGCCGATGGCCTGCTCAGCGTCGCTGCGCGCGAATTGGCCTCGGGCGTTGAAGCCAGCATCCAGGTCAAG CCGTCCTACGGCCTCACCGACGGCGAAATCGCCAAGATGCTCAAGGATTCGTTCCAATACGCCGGTGACGACAAGGTTGCTCGCGTACTGCGTGAGCAGC AAGTCGACGCCCAGCGCCTGCTCGAAGCCGTGCAGGGGGCCCTGGATGTTGACGGCGAGCGCCTGCTGGACGCCGAAGAGCGCATGGTTATTGACCTGCA GATGCAGGAACTGGCCGAACTGATAAAAGGCACCGATGGCTACGCCATCGAGCAACAGACCAAGCGTCTGTCGCAAGTGACCGATGCCTTTGCCGCCCGC CGTATGGACCAGTCGGTAAAAGCCGCCCTGGCGGGGCGCAACCTGAATGAACTCGAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTAATGCCGCAGGTCATTTTTCTGCCACACGCCGAGCATTGCCCGGATGGTATGGTCGTGGAGGCTGAGACCGGCAAGTCCATCCTCGAAGTTGCCCATG ACAACCACATCGAAATCGAAAGCGCCTGCGGCGGTGTGTGCGCCTGCACCACCTGTCATTGCGTCATTCGCGAGGGCTTCAACAGCCTTGAAGAGGCCGA TGAGCTGGAAGAGGACTTTCTTGACCGTGCGTGGGGCTTGGAAGCGACTTCGCGTCTAAGCTGTCAGGCAAAGGTCGGAACTGAAGACATCACCGTCGAA ATCCCGAAATATTCCCTCAACCATGCAGCCGAAGCGCCGCATTGATTCAAGGAAGTGTCATGAGTCTTAAATGGGTTGATGTGCAAGAGATCGCTATCCT GTTGGCCGACGGCAACCCGGGTCTGGATCCTTATTCCCTGAACTTTGTAGCTTTGCGTGACATGGTCATGGCGTTGCCAGGGTTTGAAGATGAGCGGGAT
Amino Acid Sequence
>chaperone protein HscA
MALLQIAEPGQSPQPHQRRLAVGIDLGTTNSLVAALRSGLSEPLPDADGQVILPSAVRYHADRTEVGESAKLAASADPLNTVLSVKRLMGRGLSDVKQLG DQLPYRFVGGESHMPFIDTVQGPKSPVEVSADILKVLRQRAETTLGGELVGAVITVPAYFDDAQRQATKDAAKLAGLNVLRLLNEPTAAAVAYGLDQHAE GLVAIYDLGGGTFDISILRLTGGVFEVLATGGDSALGGDDFDHTVAGWIISSAGLSADLDPGAQRNLLQTACAAKEALTDAATVEVSYGTWSAQLTREAF DALIEPMVARSLKACRRAVRDSGVELEDVGAVVMVGGSTRVPRVRDAVAEAFGRQPLTEIDPDQVVAIGAAIQADTLAGNKRDGGELLLLDVIPLSLGLE TMGGLMEKVIPRNTTIPVARAQDFTTYKDGQTAMMIHVLQGERELISDCRSLARFELRGIPAMVAGAAKIRVTYQVDADGLLSVAARELASGVEASIQVK PSYGLTDGEIAKMLKDSFQYAGDDKVARVLREQQVDAQRLLEAVQGALDVDGERLLDAEERMVIDLQMQELAELIKGTDGYAIEQQTKRLSQVTDAFAAR RMDQSVKAALAGRNLNELEE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site