Pseudomonas fluorescens SBW25, PFLU4907

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU4907
Name
Replicon chromosome
Genomic location 5387790 - 5388290 (- strand)

Cross-References

RefSeq YP_002874413.1
GI 229592294
Entrez 7820864
INSDC CAY51808.1
UniParc UPI0000F264B2
UniProtKB Acc C3JYS1
UniProtKB ID C3JYS1_PSEFS
UniRef100 UniRef100_A2VC31
UniRef50 UniRef50_A2VC31
UniRef90 UniRef90_A2VC31

Product

Feature Type CDS
Coding Frame 1
Product Name
putative OmpA family lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -0.80
Kyte-Doolittle Hydrophobicity Value -0.364
Molecular Weight (kDa) 17.7
Isoelectric Point (pI) 6.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 391 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000938 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU4907

Human Homologs

References

No references are associated with this feature.