Pseudomonas fluorescens SBW25, PFLU4607

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CTGCGCTGACGCGTTTGCGCGCCACCGCGGCGCTGACAACGATGGGCAACCCCAGCGGCTCCGACAGGGCGGTGAACACGGTATGCAGGCTTTCGTCCTG CGCCTGGTAAAGCTCGCCCCAGACGAGCGCACTTTCCGACACCAGCACGGCAAGCAGCACGGTAAACAACAACCGACGGCACAGCCAGAGACGGGGCATC GTTGCAATGAAGTCGGCGTACACCGGGGGGATTCCTGGGCAGTCTGGCATTGAGAGTGCCGCCATACTGAAAGGCCCCCCGGTTTCAATCTTGATGGAAA GTTGATGGCTGCCCGAGGCGCACCGCCCGTGGCATGTGCCTTGCTATGAACTCGGTATCAGAGCACGCACCAACGGCGGCGCGAGCTGACAGACAAAGGC GTCGTTACTCGCAGTGGCTTACATCGCCATCTGGGGGAACGACGCTTTTTTTTGAATGAAAAGGTAGGTGTAGATGAACGATTCGGTTGGCAACAGCCCG
DNA Sequence for Gene
>PFLU4607
ATGAACGACCCGCTGGCCTGGGTCAACGGCAGTGATGCCCCGGAAAAGAGCAGCCTCGACCTCGGCTTCATGGCCCTGAGCGACTGCGCCTCGATGGTGG TGGCAGCCACCCAAGGGTTCGCTCAACCTTACGGCCTGACCCTGAACCTCAAGCGTCAATCGTCCTGGGCCAACCTGCGCGACAAACTGGTCAGCGGCGA ACTGGATGCCGCCCACAGCCTGTACGGGTTGATCTATGCCGTGCACCTGGGCATCGGCGGCGTCGCGCCCACCGACATGGCTGTACTGATGGGACTCAAC CAGAACGGCCAGAGCATCAACCTGTCCCACGGTTTGCAGCAGCAAGGGGTGATCACTCCTGAGGCGCTGGACCGTCACGTGCACCAAAGCCGAACAAAAC TGACCTTCGCCCAGACCTTTCCTACGGGCACCCACGCCATGTGGCTCTATTACTGGCTGGCGAGCCAAGGGATTCATCCATTACAGGATGTGGACAGCGT GGTGGTGCCGCCACCGCAAATGCTGGCGCACCTGCAAGCCGGGCGCATCGATGGGTTTTGCGTCGGCGAACCCTGGTGTGCCAGCGCGGTAAAGCAAAAC CAAGGATTTACCTTGGCAACCACCCAGACGATCTGGCCGGATCATCCGGAAAAAGTGCTCGGTTGCACCCAGGCGTTTGTCGAACAGTACCCCAACACCG CGCGTGTACTGGTGATGGCGATTCTGGAAGCCAGTCGGTTTATCGAAGCGAGCAGCGAAAACCGCCGCTCCACCGCGCAATTGCTCAGTGGCCGCGAGTA CCTCGACGCCCCGCTCGATTGCATCGAACCGCGCCTGCTGGGCGCCTATGACGACGGCCTGGGCAACCGGTGGCAGGATCCGCACGCCCTGAGGTTTTTC GCCGGTGGTGACGTCAACCTGCCCTACCTCTCCGACGGCATGTGGTTCATGACCCAATTCCGACGCTGGGGCCTCTTGCGCGAAGACCCCGACTACCTCG GTGTCGCACGCCAGGTGCAGCAACTTGGGCTCTATCGCCAGGCCGCCGAGGCGCTGGGTATCACCACGAAAGACCAGGACATGCGCAGCAGCCAACTGAT CGACGGCAAAATCTGGGACGGCTCCGACCCCGCCAGCTATGCCCGCAGCTTCCGCCTGCATGCCCTGGCCGATCACACCCACCGCCAAGCCTTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGGAGGACGTCCATGCTGCGAATCCTGTTAATCAACGACACCCCGCGCAAGGTCGGCCGTCTCAGGGCAGCGCTGATCGAAGCCGGTTTTGAGGTGATC GATGAGTCCGGCCTGACCATCGACCTGCCCGCGCGCGTCGAAACGGTGCGCCCGGATGTCATCCTGATCGATACCGAGTCACCGGGCCGCGATGTGATGG AGCAAGTGGTGCTGGTCAGCCGCGATCAACCTCGGCCCATCGTGATGTTTACCGACGAACACGACCCGAACGTGATGCGCCAGGCGATCAAGTCCGGCGT CAGCGCCTACATCGTCGAAGGTATCCAGGCCCAGCGCCTGCAGCCGATCCTCGACGTGGCCATGGCCCGCTTCGAAAGCGACCAGGCCTTGCGCGCCCAA CTCCAGGCGCGGGACCAACAGCTCGCCGAGCGCAAGCGCATCGAGCTGGCCAAGGGCATGCTGATGAAAATGAAGGACTGCAACGAGGAAGAGGCATACA
Amino Acid Sequence
>nitrate-binding proteint
MNDPLAWVNGSDAPEKSSLDLGFMALSDCASMVVAATQGFAQPYGLTLNLKRQSSWANLRDKLVSGELDAAHSLYGLIYAVHLGIGGVAPTDMAVLMGLN QNGQSINLSHGLQQQGVITPEALDRHVHQSRTKLTFAQTFPTGTHAMWLYYWLASQGIHPLQDVDSVVVPPPQMLAHLQAGRIDGFCVGEPWCASAVKQN QGFTLATTQTIWPDHPEKVLGCTQAFVEQYPNTARVLVMAILEASRFIEASSENRRSTAQLLSGREYLDAPLDCIEPRLLGAYDDGLGNRWQDPHALRFF AGGDVNLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLGLYRQAAEALGITTKDQDMRSSQLIDGKIWDGSDPASYARSFRLHALADHTHRQALR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site