Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTGCGCTGACGCGTTTGCGCGCCACCGCGGCGCTGACAACGATGGGCAACCCCAGCGGCTCCGACAGGGCGGTGAACACGGTATGCAGGCTTTCGTCCTG CGCCTGGTAAAGCTCGCCCCAGACGAGCGCACTTTCCGACACCAGCACGGCAAGCAGCACGGTAAACAACAACCGACGGCACAGCCAGAGACGGGGCATC GTTGCAATGAAGTCGGCGTACACCGGGGGGATTCCTGGGCAGTCTGGCATTGAGAGTGCCGCCATACTGAAAGGCCCCCCGGTTTCAATCTTGATGGAAA GTTGATGGCTGCCCGAGGCGCACCGCCCGTGGCATGTGCCTTGCTATGAACTCGGTATCAGAGCACGCACCAACGGCGGCGCGAGCTGACAGACAAAGGC GTCGTTACTCGCAGTGGCTTACATCGCCATCTGGGGGAACGACGCTTTTTTTTGAATGAAAAGGTAGGTGTAGATGAACGATTCGGTTGGCAACAGCCCG
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DNA Sequence for Gene |
>PFLU4607
ATGAACGACCCGCTGGCCTGGGTCAACGGCAGTGATGCCCCGGAAAAGAGCAGCCTCGACCTCGGCTTCATGGCCCTGAGCGACTGCGCCTCGATGGTGG TGGCAGCCACCCAAGGGTTCGCTCAACCTTACGGCCTGACCCTGAACCTCAAGCGTCAATCGTCCTGGGCCAACCTGCGCGACAAACTGGTCAGCGGCGA ACTGGATGCCGCCCACAGCCTGTACGGGTTGATCTATGCCGTGCACCTGGGCATCGGCGGCGTCGCGCCCACCGACATGGCTGTACTGATGGGACTCAAC CAGAACGGCCAGAGCATCAACCTGTCCCACGGTTTGCAGCAGCAAGGGGTGATCACTCCTGAGGCGCTGGACCGTCACGTGCACCAAAGCCGAACAAAAC TGACCTTCGCCCAGACCTTTCCTACGGGCACCCACGCCATGTGGCTCTATTACTGGCTGGCGAGCCAAGGGATTCATCCATTACAGGATGTGGACAGCGT GGTGGTGCCGCCACCGCAAATGCTGGCGCACCTGCAAGCCGGGCGCATCGATGGGTTTTGCGTCGGCGAACCCTGGTGTGCCAGCGCGGTAAAGCAAAAC CAAGGATTTACCTTGGCAACCACCCAGACGATCTGGCCGGATCATCCGGAAAAAGTGCTCGGTTGCACCCAGGCGTTTGTCGAACAGTACCCCAACACCG CGCGTGTACTGGTGATGGCGATTCTGGAAGCCAGTCGGTTTATCGAAGCGAGCAGCGAAAACCGCCGCTCCACCGCGCAATTGCTCAGTGGCCGCGAGTA CCTCGACGCCCCGCTCGATTGCATCGAACCGCGCCTGCTGGGCGCCTATGACGACGGCCTGGGCAACCGGTGGCAGGATCCGCACGCCCTGAGGTTTTTC GCCGGTGGTGACGTCAACCTGCCCTACCTCTCCGACGGCATGTGGTTCATGACCCAATTCCGACGCTGGGGCCTCTTGCGCGAAGACCCCGACTACCTCG GTGTCGCACGCCAGGTGCAGCAACTTGGGCTCTATCGCCAGGCCGCCGAGGCGCTGGGTATCACCACGAAAGACCAGGACATGCGCAGCAGCCAACTGAT CGACGGCAAAATCTGGGACGGCTCCGACCCCGCCAGCTATGCCCGCAGCTTCCGCCTGCATGCCCTGGCCGATCACACCCACCGCCAAGCCTTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGGAGGACGTCCATGCTGCGAATCCTGTTAATCAACGACACCCCGCGCAAGGTCGGCCGTCTCAGGGCAGCGCTGATCGAAGCCGGTTTTGAGGTGATC GATGAGTCCGGCCTGACCATCGACCTGCCCGCGCGCGTCGAAACGGTGCGCCCGGATGTCATCCTGATCGATACCGAGTCACCGGGCCGCGATGTGATGG AGCAAGTGGTGCTGGTCAGCCGCGATCAACCTCGGCCCATCGTGATGTTTACCGACGAACACGACCCGAACGTGATGCGCCAGGCGATCAAGTCCGGCGT CAGCGCCTACATCGTCGAAGGTATCCAGGCCCAGCGCCTGCAGCCGATCCTCGACGTGGCCATGGCCCGCTTCGAAAGCGACCAGGCCTTGCGCGCCCAA CTCCAGGCGCGGGACCAACAGCTCGCCGAGCGCAAGCGCATCGAGCTGGCCAAGGGCATGCTGATGAAAATGAAGGACTGCAACGAGGAAGAGGCATACA
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Amino Acid Sequence |
>nitrate-binding proteint
MNDPLAWVNGSDAPEKSSLDLGFMALSDCASMVVAATQGFAQPYGLTLNLKRQSSWANLRDKLVSGELDAAHSLYGLIYAVHLGIGGVAPTDMAVLMGLN QNGQSINLSHGLQQQGVITPEALDRHVHQSRTKLTFAQTFPTGTHAMWLYYWLASQGIHPLQDVDSVVVPPPQMLAHLQAGRIDGFCVGEPWCASAVKQN QGFTLATTQTIWPDHPEKVLGCTQAFVEQYPNTARVLVMAILEASRFIEASSENRRSTAQLLSGREYLDAPLDCIEPRLLGAYDDGLGNRWQDPHALRFF AGGDVNLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLGLYRQAAEALGITTKDQDMRSSQLIDGKIWDGSDPASYARSFRLHALADHTHRQALR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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