Pseudomonas fluorescens SBW25, PFLU4560
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACAAACCGGTCGAAGGCATGAAGCCGCGCACCGCGCTTGAACTGGAAGGCCGCGACGTCTACATCGCCAACGGTTGTGTCGGCTGCCACTCGCAGATGAT CCGCCCGTTCCGTGCCGAAACCGAACGCTACGGCCACTACTCGGTCGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGTTCCAAGCGCACCGGC CCGGACCTGGCCCGTGTGGGCGGGCGTTACTCCGATGACTGGCAACGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCTGAGTCGAAAATGCCGGCGT ACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAGGACACCGCGAAGAAGATGGAAGTCTTGCGCACCCTGGGCGTGCCCTACACCGACGAAGACATCGC CGGTGCAGCCGCAGCCGTGAAGGGCAAGACCGAAATGGACGCATTGGTGGCCTACCTGCAAGGCCTTGGCACCATCATCAAAAGCAAACGGTGATTCTTC
|
|
| DNA Sequence for Gene |
>PFLU4560
ATGGATATCGGGATGATTCGTGGCTTGGGCACCGTTGTGGTGATGGTGGCCTTTATCGGCCTGGCGTTGTGGGTGTTCAGCCCCAAGCGCAAGTCGGAGT TTGAAGACGCGACCTTGCTGCCTTTTGCGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTACGTTCTGGAGTCTGTACGTCACAGTCCTCAGCCTGGGTACCATCTTCGCCCTGACCTGGCTGCTGCTGTCGACCCGAAAGGGCCAGCGCGCCGAGCA AACCGACGAGACCGTCGGCCACTCGTTCGACGGCATCGAGGAGTACGACAACCCGCTGCCCAAATGGTGGTTCATGCTGTTCGTCGGCACCATCATCTTC GCCCTCGGCTACCTCGCGCTGTACCCCGGCCTGGGCAACTGGAAGGGCCTGTTGCCGGGCTACAACTACCTCGACAACGACAAGCAAACCCCCTTCGCCA ACGGCCAGACCGGCTGGACCGGCGTGCACGAATGGGAAAAGGAAATGGCCAGGTCGGACGCTAAGTTCGGCCCGATCTTCGCCAAATTCGCGTCGATGCC CATTGAAGAAGTGGCCAAGGACCCGCAAGCCTTGAAGATGGGTGGCCGCCTGTTCGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGCGCC
|
|
| Amino Acid Sequence |
>cytochrome C oxidase subunit
MDIGMIRGLGTVVVMVAFIGLALWVFSPKRKSEFEDATLLPFADDPEAIKHVEQASRSNKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|