Pseudomonas fluorescens SBW25, PFLU4558
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009060 | aerobic respiration |
Inferred from Sequence Model
Term mapped from: InterPro:PF00115
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0020037 | heme binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00115
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF00115
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004129 | cytochrome-c oxidase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00780
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0045278 | plasma membrane respiratory chain complex IV |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00780
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG (InterPro) | 00190 | Oxidative phosphorylation | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
| UniPathway | UPA00705 | oxidative phosphorylation | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00115 | Cytochrome C and Quinol oxidase polypeptide I | IPR000883 | Cytochrome c oxidase subunit I | 13 | 443 | 1.9E-117 |
| SUPERFAMILY | SSF81442 | Cytochrome c oxidase subunit I-like | IPR036927 | Cytochrome c oxidase-like, subunit I superfamily | 9 | 468 | 5.89E-123 |
| NCBIfam | TIGR00780 | JCVI: cytochrome-c oxidase, cbb3-type subunit I | IPR004677 | Cytochrome c oxidase cbb3-type, subunit I | 9 | 472 | 0.0 |
| Gene3D | G3DSA:1.20.210.10 | - | IPR036927 | Cytochrome c oxidase-like, subunit I superfamily | 2 | 472 | 0.0 |
| FunFam | G3DSA:1.20.210.10:FF:000005 | Cytochrome c oxidase, cbb3-type, subunit I | - | - | 1 | 470 | 0.0 |
| PANTHER | PTHR10422 | CYTOCHROME C OXIDASE SUBUNIT 1 | IPR000883 | Cytochrome c oxidase subunit I | 10 | 464 | 4.4E-64 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.