Pseudomonas fluorescens SBW25, PFLU3550

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CATTTGGCACCGCACGCAACTAAACAAGAAAAAACAAGACAATAAGTCCACAAAAGACCAACTAAGCACATTTAATGTGCGCCTCAGAAAGTCATCTTCG CATCGCTGGAATTCCTGCGAAGCTCACGAACCTTAGCCATGCCTAAAACATTCAGCAAGCGACGGAGCCACACTTAATCCTTTTCCTACAAACGCCTAAA CACTGGGACTGCGCAGCATTTTGCGCACTCACCACCCACATAAACACCCGATATCCCCACCCACCTCAACAGTTACAAAACAACTTAACTGAGCAATTAA ATGCGCACCGTTGCGCAATCAAATACTTAACCAACCCCATCAATCCTGACTAATCACACTGAAAATTCGAACTTATAGAATGCAACACCCTTGTTTTATT GCCCCCCACACTTTCAGGCACGTTTCTTGTTATAGGCACTTGCCCAGCCGATGCAGTTGTCGGTTGGAACTACCTCATCAATCAGGCAAGGAAACCCGTC
DNA Sequence for Gene
>PFLU3550
ATGCCAACACCCGCGTATCTTTCCATCACCGGTGTCAAACAAGGTTTGATTACGGCAGGCACGTTTACCCAGGACTCGGTAGGTAATATTTACCAAGAAG GCCATGAGGATCAGATTCTGGTCCAGGCTTTTGCTCATCAAGTGATCATCCCGCGCGACCCACAATCCGGCCAGCCAACAGGCCAAAGGGTCCATAAACC GTTGATGATCAGCAAAGTGTTCGATAAGTCCTCGCCCTTGCTGTTCAGCGCGTTGACCAGCGGCGAAGAGGTCAAGTGCCGGCTCGAATGGTTACGCACC TCGTCGGCCGGCACCCAAGAGCACTACTTCACGATTGAACTGGAGGGGGCAACCATCGTCGACATCCAGTCGCGCATGCCCAACTGCCAGGATCCGGACA ACGCCCATTTCACCCACTTGGAAGATGTGTACTTCACCTATCGCAAGATCGTATGGACCCACGAAGTGTCCGGCACTTCCGGGTCGGATGACTGGCGCAG CCCGGTAGCGGGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCGCTTTAACGCAGGTACGGCGCCAGGGAAGGCGCCGTACCTGCCATCCCGCTACACCATCGCCAACGGGTGCTTGCGCTTGGGAGCGCCAAACACGCG ATCGATAGCATCTAGGTCGTGTTCATCCAGCACGAGTTTGGCTGCGGCTGCGTTGAGTCGCACGTGTTCCGGGGTGACCGCCTTGGGGATCGCGATCACA CCGTCCTGGCGCAATACCCAGGCCAGCGAAACCTGGGCCGGTGTCACCTCGTGGCGATGGGCGATCTGCTTCAGGGTCGGGCTGGCCAACAGCTCGCCAC CCTGAGCGATCGGGCAGTACGCCATCAAGGGCAAGTGATGCTGTTGCCACCAGGGCAGCAGGTCGAATTCGATGCCGCGCTCTTCGATGTTGTAGAGCAC CTGGTTGGTGGCGCAGGCCGGAGAGGCGAGTTCCTGCAGGTCGGCCACATCGAAATTGGAGACGCCCCAGCGGCCGATCTTGCCGGCTTCGCGCAGGCGC
Amino Acid Sequence
>hypothetical protein
MPTPAYLSITGVKQGLITAGTFTQDSVGNIYQEGHEDQILVQAFAHQVIIPRDPQSGQPTGQRVHKPLMISKVFDKSSPLLFSALTSGEEVKCRLEWLRT SSAGTQEHYFTIELEGATIVDIQSRMPNCQDPDNAHFTHLEDVYFTYRKIVWTHEVSGTSGSDDWRSPVAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site