Pseudomonas fluorescens SBW25, PFLU3547
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCAAGGAACGTATCAATATCACGTTCAAACCCGCCATCGGCGGGGCGCAGGAAGAAGTCGAACTGCCGTTGAAACTATTGGTGCTGGGAGATTTCACCCA ACGTGAGGACGCGCGCAAGCTTGAAGATCGCAAACCCATCGCGATCGACAAAAACACCCTTGATGACGTGCTGGCCAAACAGGCGTTGAGCCTGACGCTG AATGTGCCCAATCGTCTGCAGGAGGATGCGCACGTTGAGGAGCTGGCCATTCAGGTACGCATTAACGCCATGAAGGATTTCAATCCCGCGAACCTGGTTG AGCAGGTTCCGGAGTTGCACAAGCTGATGGCGTTGCGCGAGGCACTGATGGCTCTCAAGGGCCCACTGGGCAACACCCCGAGCTTTCGCAAGGCCATCGA ACAGGCCCTGGCCGATGACGAGTCCCGCGCGCGGGTACTGGCCGAGCTGGGCCTGGGCAGCCCGGACGCCTGACATTTTCAGTAAAAGGACACTGACCGC
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| DNA Sequence for Gene |
>PFLU3547
ATGACCACACCACAACACGCGCTACCGGCACAAACCGCTGATGAATACAGCATCCTCGACAACATCGTTGCCCAGACGCTACTGAGTGCCGATGACGAAG CGTATGGCATTGCCAAACGGGGTGTCTCGGCGTTTATCGAAGAGTTGATCAAGCCGCAGAACCGTGGCGAGCCGGTAAAAAAACGCTTGGTCGACCGGAT GATTGCCGAGATCGACACCAAGCTCAGTCTGCAAATGGACGAGATATTGCACCACCCGGACTTTCAGGCCCTGGAAGCGTCCTGGAAAGGGCTCCAGTTG TTGGTGGATCGCACCGACTTTCGCGAAAACATCAAGATCGAACTCTTGAACGTTTCCCGGCAAGACCTGCTGGAAGACTTCGAAGACTCACCGGAAGTGA CCCAGTCGGGCTTGTACAAACATATCTACAGTGCTGAATACGGCCAGTTTGGCGGTCAGCCTGTGGGCGCGATCATTGCCAACTATTTTCTGTCGCCCAG CGCGCCTGATGTAAAGCTGATGCAATACGCTTCCAGTGTGGCTTGCATGGCGCATGCGCCCTTTATCGCCGCAGCCGCGCCAGCGTTCTTCGGGTTGGAG AGCTTCACCGGCTTACCGGATCTCAAAGATCTGAAGGACCATTTCGAAGGCCCGCAATTTGCCAAATGGCAAAGCTTTCGCCAGAGCGAGGACGCGCGTT ACATCGGGTTGACCGTGCCGCGTTTCTTGCTCCGTACGCCTTATGACCCCCTCGAATGCCCGGTCAAGACCTTTGCCTACCAGGAAAACGTGGTCAACAG CCACGAACATTACCTGTGGGGCAATACAGCCTACGCCTTTGCCACGCGCCTGACCGATAGCTTCGCGCGCTTTCGCTGGTGCCCGAACATCATCGGCCCG CAAAGCGGTGGCGCGGTAGAAGACTTGCCGTTGCATCACTTCCACAGCATGGGGGAGATTGAAACCAAGATCCCGACCGAAGTGCTGGTTTCCGACCGTC GTGAATACGAACTGGCGCAAGAGGGCTTCATTGCCTTGACGATGCGCAAGGGCAGTGACAACGCCGCGTTCTTCTCTGCCAGCTCGGTACAAAAGCCGAA ACACTTCGGCCTCAGCCCCGAGGGCAAGGAAGCAGAGCTGAATTACCGCTTGGGAACACAGTTGCCCTACATGATGGTGGTCAATCGCCTGGCCCATTAC CTCAAGGTCCTTCAGCGCGAACAACTGGGTTCATGGAAGGAGCGCACCGACCTGGAGCTGGAGCTCAATAAATGGATTCGCCAGTACGTCGCCGACCAGG AAAACCCCAGTGCCGAAGTGCGCGGGCGGCGCCCCTTGCGCGCAGCACGCATCGTTGTCAGTGATGTCGAGGGTGAGCCTGGCTGGTATCGCGTCAACCT GAGTGTGCGACCGCACTTCAAGTACATGGGGGCGGATTTCACGCTGTCCCTGGTTGGCAAGCTCGATAAAGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGAGGCCAGGGAATGCCCCACTACCAAAGCCTTTTCGAGCGACTCGAGCGTCCGGCGACGACCCGGGCGTGTGGCGTGACATCGGTTGCACTCCATCT GGGGAAAATGCTCAGCATCCGTGCGGGCAGTGTGCAGACACTGCCCGACTACGGCTTGCCCGACCTTAATGATATGAATCAGAGCCTGCATGAATCATTG AGTCAGTCGCGCGTGTTGATCGAGCGATTTATCCGCGCCTACGAGCCGCGCTTGAAGCAGGTGCGGGTCAAGACATTGCCACGGGATCATGATCCGTTGG CCCTGGCGTTCGCTATCGAAGCCACACTGGTGATCAAGGGTGCCGAGCAACCCGTGGTGTTTACCGCGCGGTTATGGACAGTGAATACCCGCAGGATGAA AAAACCGTGCTGCTTGACCGTGAAGGGTTGGGCCCGGTGCGGGGCGCCGTCACGGACTACCCGTCGCCGCCTCGCTTCGAGCAGTTGGAAGACCGCATGA
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| Amino Acid Sequence |
>hypothetical protein
MTTPQHALPAQTADEYSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVKKRLVDRMIAEIDTKLSLQMDEILHHPDFQALEASWKGLQL LVDRTDFRENIKIELLNVSRQDLLEDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSVACMAHAPFIAAAAPAFFGLE SFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVPRFLLRTPYDPLECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP QSGGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSASSVQKPKHFGLSPEGKEAELNYRLGTQLPYMMVVNRLAHY LKVLQREQLGSWKERTDLELELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVEGEPGWYRVNLSVRPHFKYMGADFTLSLVGKLDKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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