Pseudomonas fluorescens SBW25, PFLU3237

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0015627	type II protein secretion system complex	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR38779	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0015628	protein secretion by the type II secretion system	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR38779	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF54523	Pili subunits	IPR045584	Pilin-like	41	120	4.92E-11
NCBIfam	TIGR02532	JCVI: prepilin-type N-terminal cleavage/methylation domain	IPR012902	Prokaryotic N-terminal methylation site	8	30	1.3E-8
Pfam	PF02501	Type II secretion system (T2SS), protein I	IPR003413	Type II secretion system protein GspI, C-terminal	43	120	1.1E-15
NCBIfam	TIGR01707	JCVI: type II secretion system minor pseudopilin GspI	IPR010052	Type II secretion system protein GspI	9	105	8.1E-23
Pfam	PF07963	Prokaryotic N-terminal methylation motif	IPR012902	Prokaryotic N-terminal methylation site	5	29	1.4E-10
Gene3D	G3DSA:3.30.1300.30	-	-	-	38	120	1.7E-8
PANTHER	PTHR38779	TYPE II SECRETION SYSTEM PROTEIN I-RELATED	IPR010052	Type II secretion system protein GspI	1	122	2.4E-17
SUPERFAMILY	SSF54523	Pili subunits	IPR045584	Pilin-like	10	34	9.73E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.