Pseudomonas fluorescens SBW25, PFLU2543 (pvdI)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0031177 | phosphopantetheine binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00823
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00668
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| UniPathway | UPA00094 | fatty acid biosynthesis | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.559.10 | - | IPR023213 | Chloramphenicol acetyltransferase-like domain superfamily | 63 | 437 | 0.0 |
| FunFam | G3DSA:1.10.1200.10:FF:000005 | Nonribosomal peptide synthetase 1 | - | - | 1017 | 1092 | 1.4E-22 |
| Pfam | PF00550 | Phosphopantetheine attachment site | IPR009081 | Phosphopantetheine binding ACP domain | 3546 | 3610 | 3.1E-13 |
| CDD | cd17649 | A_NRPS_PvdJ-like | - | - | 2010 | 2497 | 0.0 |
| Gene3D | G3DSA:3.30.300.30 | - | IPR045851 | AMP-binding enzyme, C-terminal domain superfamily | 4484 | 4590 | 9.4E-38 |
| FunFam | G3DSA:3.30.300.30:FF:000010 | Enterobactin synthetase component F | - | - | 2402 | 2504 | 9.5E-36 |
| NCBIfam | TIGR01733 | JCVI: amino acid adenylation domain | IPR010071 | Amino acid adenylation domain | 3075 | 3467 | 0.0 |
| Pfam | PF00550 | Phosphopantetheine attachment site | IPR009081 | Phosphopantetheine binding ACP domain | 2518 | 2580 | 2.7E-11 |
| Gene3D | G3DSA:1.10.1200.10 | - | IPR036736 | ACP-like superfamily | 4591 | 4670 | 1.2E-25 |
| Gene3D | G3DSA:3.30.559.30 | Nonribosomal peptide synthetase, condensation domain | - | - | 1263 | 1526 | 3.0E-83 |
| Gene3D | G3DSA:3.40.50.980 | - | - | - | 2006 | 2317 | 1.0E-95 |
| FunFam | G3DSA:3.40.50.12780:FF:000012 | Non-ribosomal peptide synthetase | - | - | 522 | 918 | 0.0 |
| Gene3D | G3DSA:3.30.300.30 | - | IPR045851 | AMP-binding enzyme, C-terminal domain superfamily | 3437 | 3533 | 2.1E-30 |
| FunFam | G3DSA:1.10.1200.10:FF:000005 | Nonribosomal peptide synthetase 1 | - | - | 4592 | 4668 | 4.4E-22 |
| Pfam | PF00668 | Condensation domain | IPR001242 | Condensation domain | 58 | 507 | 1.3E-114 |
| SUPERFAMILY | SSF56801 | Acetyl-CoA synthetase-like | - | - | 1962 | 2529 | 0.0 |
| FunFam | G3DSA:3.30.559.10:FF:000016 | Nonribosomal peptide synthase Pes1 | - | - | 1095 | 1262 | 1.1E-46 |
| FunFam | G3DSA:3.30.559.10:FF:000012 | Non-ribosomal peptide synthetase | - | - | 63 | 260 | 8.7E-65 |
| FunFam | G3DSA:3.30.559.30:FF:000001 | Non-ribosomal peptide synthetase | - | - | 2772 | 3017 | 1.2E-80 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | - | - | 1100 | 1288 | 3.0E-39 |
| Gene3D | G3DSA:3.30.300.30 | - | IPR045851 | AMP-binding enzyme, C-terminal domain superfamily | 918 | 1012 | 1.2E-31 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | - | - | 3631 | 3801 | 4.0E-48 |
| CDD | cd17646 | A_NRPS_AB3403-like | - | - | 525 | 1007 | 0.0 |
| FunFam | G3DSA:3.30.300.30:FF:000010 | Enterobactin synthetase component F | - | - | 3437 | 3532 | 1.4E-31 |
| SUPERFAMILY | SSF47336 | ACP-like | IPR036736 | ACP-like superfamily | 2508 | 2580 | 1.07E-18 |
| SUPERFAMILY | SSF47336 | ACP-like | IPR036736 | ACP-like superfamily | 3538 | 3610 | 4.58E-19 |
| Pfam | PF13193 | AMP-binding enzyme C-terminal domain | IPR025110 | AMP-binding enzyme, C-terminal domain | 933 | 1001 | 3.8E-11 |
| SUPERFAMILY | SSF56801 | Acetyl-CoA synthetase-like | - | - | 489 | 1039 | 0.0 |
| Pfam | PF00668 | Condensation domain | IPR001242 | Condensation domain | 3628 | 4068 | 1.9E-107 |
| FunFam | G3DSA:3.40.50.980:FF:000001 | Non-ribosomal peptide synthetase | - | - | 550 | 684 | 9.9E-45 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | - | - | 1277 | 1524 | 2.33E-42 |
| SMART | SM00823 | Phosphopantetheine attachment site | IPR020806 | Polyketide synthase, phosphopantetheine-binding domain | 1026 | 1094 | 7.2E-4 |
| Gene3D | G3DSA:3.40.50.980 | - | - | - | 550 | 685 | 4.5E-113 |
| Gene3D | G3DSA:3.40.50.980 | - | - | - | 3076 | 3208 | 5.4E-101 |
| NCBIfam | TIGR01720 | JCVI: non-ribosomal peptide synthase domain TIGR01720 | IPR010060 | Non-ribosomal peptide synthase | 1393 | 1547 | 1.9E-47 |
| FunFam | G3DSA:3.40.50.980:FF:000002 | Enterobactin synthetase component F | - | - | 685 | 837 | 7.8E-48 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | - | - | 2603 | 2768 | 1.45E-50 |
| SUPERFAMILY | SSF47336 | ACP-like | IPR036736 | ACP-like superfamily | 4593 | 4664 | 7.46E-19 |
| CDD | cd19531 | LCL_NRPS-like | - | - | 2600 | 3014 | 0.0 |
| FunFam | G3DSA:3.40.50.980:FF:000001 | Non-ribosomal peptide synthetase | - | - | 3076 | 3208 | 7.8E-48 |
| FunFam | G3DSA:1.10.1200.10:FF:000016 | Non-ribosomal peptide synthase | - | - | 2504 | 2588 | 1.1E-24 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | - | - | 246 | 512 | 1.03E-63 |
| CDD | cd19543 | DCL_NRPS | - | - | 1559 | 1963 | 0.0 |
| NCBIfam | TIGR01733 | JCVI: amino acid adenylation domain | IPR010071 | Amino acid adenylation domain | 549 | 949 | 0.0 |
| SUPERFAMILY | SSF56801 | Acetyl-CoA synthetase-like | - | - | 4046 | 4613 | 0.0 |
| SMART | SM00823 | Phosphopantetheine attachment site | IPR020806 | Polyketide synthase, phosphopantetheine-binding domain | 2516 | 2585 | 0.0053 |
| Pfam | PF00550 | Phosphopantetheine attachment site | IPR009081 | Phosphopantetheine binding ACP domain | 1028 | 1088 | 8.4E-15 |
| Gene3D | G3DSA:3.40.50.980 | - | - | - | 532 | 837 | 4.5E-113 |
| Gene3D | G3DSA:3.40.50.980 | - | - | - | 2024 | 2160 | 1.0E-95 |
| NCBIfam | TIGR01733 | JCVI: amino acid adenylation domain | IPR010071 | Amino acid adenylation domain | 4109 | 4513 | 1.5E-119 |
| Gene3D | G3DSA:1.10.1200.10 | - | IPR036736 | ACP-like superfamily | 1013 | 1095 | 1.2E-24 |
| FunFam | G3DSA:3.30.300.30:FF:000010 | Enterobactin synthetase component F | - | - | 919 | 1015 | 2.8E-32 |
| FunFam | G3DSA:2.30.38.10:FF:000001 | Non-ribosomal peptide synthetase PvdI | - | - | 839 | 915 | 8.4E-31 |
| FunFam | G3DSA:3.40.50.12780:FF:000012 | Non-ribosomal peptide synthetase | - | - | 3048 | 3436 | 4.8E-124 |
| Pfam | PF00501 | AMP-binding enzyme | IPR000873 | AMP-dependent synthetase/ligase domain | 4089 | 4489 | 1.1E-85 |
| CDD | cd19531 | LCL_NRPS-like | - | - | 3628 | 4048 | 0.0 |
| Gene3D | G3DSA:1.10.1200.10 | - | IPR036736 | ACP-like superfamily | 3534 | 3614 | 2.1E-25 |
| FunFam | G3DSA:1.10.1200.10:FF:000005 | Nonribosomal peptide synthetase 1 | - | - | 3536 | 3613 | 2.3E-22 |
| FunFam | G3DSA:3.30.559.10:FF:000012 | Non-ribosomal peptide synthetase | - | - | 3631 | 3823 | 2.7E-61 |
| Gene3D | G3DSA:3.40.50.980 | - | - | - | 4110 | 4245 | 8.3E-90 |
| Pfam | PF00668 | Condensation domain | IPR001242 | Condensation domain | 1556 | 1981 | 1.9E-80 |
| Pfam | PF00668 | Condensation domain | IPR001242 | Condensation domain | 2601 | 3033 | 2.4E-106 |
| NCBIfam | TIGR01733 | JCVI: amino acid adenylation domain | IPR010071 | Amino acid adenylation domain | 2023 | 2432 | 4.1E-121 |
| SUPERFAMILY | SSF56801 | Acetyl-CoA synthetase-like | - | - | 3014 | 3558 | 0.0 |
| Gene3D | G3DSA:3.30.559.30 | Nonribosomal peptide synthetase, condensation domain | - | - | 244 | 491 | 0.0 |
| Gene3D | G3DSA:3.40.50.980 | - | - | - | 3058 | 3355 | 5.4E-101 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | - | - | 2774 | 3040 | 1.89E-64 |
| CDD | cd17649 | A_NRPS_PvdJ-like | - | - | 4096 | 4582 | 0.0 |
| CDD | cd19534 | E_NRPS | - | - | 1106 | 1522 | 0.0 |
| Pfam | PF13193 | AMP-binding enzyme C-terminal domain | IPR025110 | AMP-binding enzyme, C-terminal domain | 2416 | 2490 | 5.6E-13 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | - | - | 3807 | 4051 | 3.78E-63 |
| Gene3D | G3DSA:2.30.38.10 | Luciferase; Domain 3 | - | - | 2318 | 2398 | 5.0E-22 |
| Gene3D | G3DSA:3.30.300.30 | - | IPR045851 | AMP-binding enzyme, C-terminal domain superfamily | 2402 | 2504 | 8.3E-34 |
| SUPERFAMILY | SSF47336 | ACP-like | IPR036736 | ACP-like superfamily | 1019 | 1088 | 2.62E-18 |
| SMART | SM00823 | Phosphopantetheine attachment site | IPR020806 | Polyketide synthase, phosphopantetheine-binding domain | 4601 | 4670 | 0.0021 |
| SMART | SM00823 | Phosphopantetheine attachment site | IPR020806 | Polyketide synthase, phosphopantetheine-binding domain | 3545 | 3614 | 0.0038 |
| FunFam | G3DSA:2.30.38.10:FF:000001 | Non-ribosomal peptide synthetase PvdI | - | - | 4402 | 4479 | 4.4E-33 |
| Gene3D | G3DSA:3.30.559.30 | Nonribosomal peptide synthetase, condensation domain | - | - | 2772 | 3016 | 0.0 |
| Gene3D | G3DSA:3.30.559.30 | Nonribosomal peptide synthetase, condensation domain | - | - | 3805 | 4051 | 0.0 |
| Pfam | PF00501 | AMP-binding enzyme | IPR000873 | AMP-dependent synthetase/ligase domain | 529 | 925 | 8.7E-100 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | - | - | 1555 | 1738 | 1.45E-38 |
| Gene3D | G3DSA:1.10.1200.10 | - | IPR036736 | ACP-like superfamily | 2505 | 2586 | 2.0E-26 |
| Gene3D | G3DSA:2.30.38.10 | Luciferase; Domain 3 | - | - | 838 | 915 | 6.6E-32 |
| Gene3D | G3DSA:2.30.38.10 | Luciferase; Domain 3 | - | - | 3356 | 3433 | 1.0E-29 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | - | - | 63 | 240 | 1.04E-48 |
| FunFam | G3DSA:3.40.50.980:FF:000001 | Non-ribosomal peptide synthetase | - | - | 4110 | 4245 | 2.8E-43 |
| Pfam | PF13193 | AMP-binding enzyme C-terminal domain | IPR025110 | AMP-binding enzyme, C-terminal domain | 3451 | 3519 | 4.3E-9 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | - | - | 1725 | 1972 | 4.11E-51 |
| Pfam | PF00550 | Phosphopantetheine attachment site | IPR009081 | Phosphopantetheine binding ACP domain | 4602 | 4664 | 5.3E-13 |
| Gene3D | G3DSA:3.30.559.10 | - | IPR023213 | Chloramphenicol acetyltransferase-like domain superfamily | 1096 | 1262 | 7.6E-45 |
| FunFam | G3DSA:3.30.300.30:FF:000010 | Enterobactin synthetase component F | - | - | 4483 | 4589 | 3.8E-35 |
| Gene3D | G3DSA:3.30.559.10 | - | IPR023213 | Chloramphenicol acetyltransferase-like domain superfamily | 1561 | 1914 | 1.7E-120 |
| CDD | cd19531 | LCL_NRPS-like | - | - | 63 | 488 | 0.0 |
| PANTHER | PTHR45398 | - | - | - | 2529 | 3559 | 0.0 |
| Pfam | PF00668 | Condensation domain | IPR001242 | Condensation domain | 1104 | 1534 | 1.8E-77 |
| Pfam | PF13193 | AMP-binding enzyme C-terminal domain | IPR025110 | AMP-binding enzyme, C-terminal domain | 4497 | 4575 | 1.1E-12 |
| Gene3D | G3DSA:3.30.559.10 | - | IPR023213 | Chloramphenicol acetyltransferase-like domain superfamily | 2603 | 2963 | 0.0 |
| Gene3D | G3DSA:3.30.559.10 | - | IPR023213 | Chloramphenicol acetyltransferase-like domain superfamily | 3630 | 3997 | 0.0 |
| CDD | cd12116 | A_NRPS_Ta1_like | - | - | 3062 | 3525 | 0.0 |
| FunFam | G3DSA:3.30.559.10:FF:000012 | Non-ribosomal peptide synthetase | - | - | 2603 | 2788 | 9.5E-59 |
| FunFam | G3DSA:3.40.50.980:FF:000001 | Non-ribosomal peptide synthetase | - | - | 2024 | 2160 | 4.5E-40 |
| Gene3D | G3DSA:3.40.50.980 | - | - | - | 4092 | 4401 | 8.3E-90 |
| FunFam | G3DSA:2.30.38.10:FF:000001 | Non-ribosomal peptide synthetase PvdI | - | - | 3356 | 3433 | 6.2E-32 |
| Gene3D | G3DSA:2.30.38.10 | Luciferase; Domain 3 | - | - | 4406 | 4483 | 3.1E-28 |
| Pfam | PF00501 | AMP-binding enzyme | IPR000873 | AMP-dependent synthetase/ligase domain | 3054 | 3443 | 1.1E-100 |
| Gene3D | G3DSA:3.30.559.30 | Nonribosomal peptide synthetase, condensation domain | - | - | 1727 | 1978 | 1.7E-120 |
| Pfam | PF00501 | AMP-binding enzyme | IPR000873 | AMP-dependent synthetase/ligase domain | 2004 | 2408 | 1.5E-86 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.