Pseudomonas fluorescens SBW25, PFLU2414
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGGCTCGGAGGACCTGGCCAACGACGTGCTGCACGAAACCTACCTGCGGGTCGACCGCATGGAGGTGCCGCCAAACCTGCAACAGCCCAATGCCTACCTG TACCGCATGGCCTTGAACATCGCCGCCGACCGCCGCCAGGCCGACGCGCGCTTGCTCACCGGCAGCGAGGTCGAAGAATTGTTGCAAAGCGCCGACGAAG CCCAGGACCCCTCGCGTGTGGTAGGCGGCCAGAAAGAAATCCAATCCCTGGTCAAAGCCCTTTACGAGTTGCCGGCACGCCGCCGCAAAATCCTGATCGC CGCCCGCCTGGAAGAGGCGCCGCACCTGGAAATTTCCCAGCGTTTCGGCATCTCCACGCGCATGGTCGAGAAAGAAATCAAGGCCGCCTTGGACCATTGT GCCAAGCGCCTGGAAAGAAAAGTGATTCAGCGGTTCGGTCCCGGTGCCGGAAAACCGTCTTAGTGTCGAGTCCCTGATAAAACCGTGAGTACGTGCGCGC
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| DNA Sequence for Gene |
>PFLU2414
TTGAATATTTTTAGCTTCTCCACCGCCCGGCAGTCCGCCGCCAGCCCCCTGCACGATGAAGCCCGCGACTGGCTGGTCCTGCTGACCTCTGGCCGCGCCA CCGTGGCCGATGCCAAGGCCCTCAAGGCGTGGTGCGCGCAGAGCCCCGCGCATGCCCAAGCATTCGAACAGGCCAAGACGCTGTGGCAGCAAGTGGCACC GGCGCTCGATCACGTGTCGCAACCGCGCAGCTTTGGCCGGCGTGCCTTCCTTGGCGGTGCGCTCGCCGCTTCGGCGGCCGTGGTGATGGTGCGCGTCGGC GTACCGGGCGGTTTTGCCGGGCTCACGGCTGACTATCGCACCGCCGTCGGCGAGCAGCGCCAAGTGGTGTTGAGCGAGGGGGTTAGCCTGGAACTCAATA CCCAGACCCGCATCAGCCGGGTCGGGCAGGGCATTGAATTGCTCGAAGGTGAAGTCGAGGTGTTCGCCCACGTTGCCCAACCGCTCAAGGTCCAGGCCGG CGAGGGCTGGGTGAGTGCGGCGCAGGCGCGGTTCAATGTGCGCAACACCGACCATAACGTGTGTATCACCTGTATCCAGGGTTCGCTCTCGGTGGATATC GCCGGGCGCAGCGTGCGCCTGGACCAAGGCCGACAATTGACCTACGGCGCCGCCGGAATCAGCGACGTGACAAGCGTGGACACCCAGGCGGTGCTGGCCT GGCGCGAACAGGTGCTGGTGTTCAACAACGCCACGCTGGCGACGGTGGTGGATGAGATCAACCGGTATCGGCCGGGGATGCTGGTGTTGCTGAATAAACA ACTGGGCCAGCGCCGGGTGCAGGCGCGGTTCAGTTTGCAGCAGCTGGCGGGCGTGGCGTTGTTGATCCGGGATGCCTATGGGGCCAAGTGCACGGAGTTG CCGGGTGGGGTGGTGTTGTTGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTCACTTCAACGGCCCCACCACCTGCCTATACGTTTCCACCCCCTGCGGCGTCTGCCGTACCAGGCTGATTTCCAATCCCAACGGATCCTCGCGCCGATT CCCGCTTAACTGCCTCCAGCCCTTATCCGGCTCCCACACTCGCACCTGCACGTCACTCACGCCGGTCAACACCACCAGCCCATCCTTCGCCGCCGGCAAC GGGTAGCGGTCACGTGTCGGCGCGGCGGCCCGATACAGGGCGTCGCCCTTGAGCCACCAGCGCACCCGTTGCAGGCCATCGCCTGCCACCGGGGCGCTGC GGATCACGTCGAGACGGAAGCCTTTGCTGTCGGAACTGCGCACCGTGATTGCGGCCAAGCCTGTGTCTTGCGGCGCGTCTGGGGCTGTCAGTTCAACACT GGCCCGCAGGCTGATATCCCGCTGCATCTGGTTCAACGCTCTCAGCAACACCTCGGTTTGCTCGGTACTCGCCTGCAAGTGCTGATCCGCACGGGTGACG
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| Amino Acid Sequence |
>putative iron siderophore-like protein
MNIFSFSTARQSAASPLHDEARDWLVLLTSGRATVADAKALKAWCAQSPAHAQAFEQAKTLWQQVAPALDHVSQPRSFGRRAFLGGALAASAAVVMVRVG VPGGFAGLTADYRTAVGEQRQVVLSEGVSLELNTQTRISRVGQGIELLEGEVEVFAHVAQPLKVQAGEGWVSAAQARFNVRNTDHNVCITCIQGSLSVDI AGRSVRLDQGRQLTYGAAGISDVTSVDTQAVLAWREQVLVFNNATLATVVDEINRYRPGMLVLLNKQLGQRRVQARFSLQQLAGVALLIRDAYGAKCTEL PGGVVLLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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