Pseudomonas fluorescens SBW25, PFLU2055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TTGACGTTCACGCATATGTTCCTCGGTATTGCCGAAGGCGCTTTCGAAGAAGCGCGCAACTACACGCTCACCGAGACCCGCTCGTGGCATAAGTCCAGCG CCGAAGACGTGCGCCAGGACCCTTACGTGCTGCACCACTACGGCGAATTCTGGGTCGCCCTGGAAGGTGTGCGCCTGTTGGTGGAACGCGCTGCCGAGTT GCTCGACCACGCCTGGGCGAAGGGCCCGAACCTCAGCGAAAGCGAGCGCGGCCAACTGGCTATCGCCATTGCCACCGCCAAAGTTGCCGCGACCCGCCAA GGCCTGGACCTGTGCAGCCGTCTGTTCGAAGTCACTGGCGCGCGCGCAACCCATGCATCGCTGCGCCTGGACCGTCATTGGCGCAACCTGCGCACGCAAA CCCTGCACGACCCGGTGGACTACAAGCTCCATGAACTGGGGGATTGGGCGTTGAACCAATCCCTGCCGATTCCGACGTTCTATTCCTAAGAGAGGTGCCC
DNA Sequence for Gene
>PFLU2055
ATGCAGCTTTTGACCCTACCGCCCTCGCCCGCCCTCGCGACGTCGATCCGCGCCACGGCCCAGGTCTTCGAAGACCCCAAATCCCAGGCGCTGCTCGACC ACATCCAGCAAGTGGCGCCCAGCGAAGCCAGCGTGCTGATCATCGGCGAGACCGGGACCGGTAAAGAGCTGGTGGCACGGCATATTCACAACCTCAGCGC GCGACGCAACCGGCCGTTCGTGGCGGTGAACTGCGGGGCGTTCTCCGAATCGTTGGTGGAAGCCGAACTGTTCGGCCATGAAAAAGGCGCCTTCACCGGT GCCCTCAGCGCCAAGGCCGGCTGGTTCGAAGAAGCCGACGGCGGCACCTTGTTCCTGGACGAGATCGGCGATTTGCCGATGGCAATCCAAGTCAAGCTGC TGCGCGTCCTACAGGAACGCGAAGTCGTGCGCCTGGGTTCGCGCAAGAGCATTGCGATTGATGTGCGTGTGCTTGCCGCCACCAACGTACAACTGGAAAA AGCCATCAACGCCGGGCATTTCCGCGAGGACCTCTACTACCGCCTCGACGTGGTCAGCCTGGAACTCAGCCCGTTGCGCGAGCGGCCCGGCGATATCCTG CCGCTGACCCGGCACTTCATCGACGCCTACAGCCAGCGCCTGGGCTACGGCCCGATCACCATCAGCCGCGAGGCCGAGCACAAGCTCAAAAGCTACAGCT GGCCAGGCAATATCCGCGAGCTGGAAAACGTGATCCACCACACGCTGTTGATCTGCCGCAACGGCGTGATCGAACGCGACGATTTGCGCCTGTCGAACAT GCGCATCGAGCGCCAGGACGACAGCCAGCACGGCACCGACAACAGCGCCGAAGCCTTGCTGGCGCGCGCGTTCCAAAAGCTCTTCGAGGAACAGGCCGGC GCCCTGCATGAAAAAGTCGAGGATGCCCTGCTACGCGCTGCTTATCGTTTCAGCCATTACAACCAAGTGCACACCGCCAACCTGCTGGGCTTGAGCCGCA ACGTCACGCGCACGCGCCTGATCAAGATCGGCGAGCTGGCGGTGAACAAGCGCCGCCCCGGCGAAAACGTGCAGGGCGAACGCATGTTGCATCTATCCAT TTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGCAATGCAGCGCGTTGTCATGGCTGCGCTCGAAACTGCGCAGCACCTGGAACGAACCAAAGGTCACGGCTGTGGCCTGATGGGCGCGAATCAACGTC CAGAAATCTTCCTCGCCATGCTCAAAGCATTTGAAGGCCGCCTCGCCGTCCTCGCGCGAGCGCCATTGCAAGTAATTGAGCACCCGGCGCCCGTCGTCGC TGACCTGCACACTCGCATTGATAAAGCCGCCATGGCCCTGGGCCAGGCGCTCGCTTTGGGGGGACAGGGCCGCCACCAGCGCCCTTTGTTGCCGGGGCTC GATCTGAAATTCGATCAATTGAGTGAAGCTGCGATTCTTCTCTGATACCTGCATGAACACTCCCCTTTCTCTGTAGGCAGAATCTTGCGATTCGATGCCA CGCAGGGTAAAACCTCTAGTTAAGTCAAGGTCAAGCGTTGTTTGGGAGTTTTTCATGCTGAACAAGGAACTCACCGTCGGCCAACTCGCCGCCCGCAGTG
Amino Acid Sequence
>putative sigma54-dependent regulatory protein
MQLLTLPPSPALATSIRATAQVFEDPKSQALLDHIQQVAPSEASVLIIGETGTGKELVARHIHNLSARRNRPFVAVNCGAFSESLVEAELFGHEKGAFTG ALSAKAGWFEEADGGTLFLDEIGDLPMAIQVKLLRVLQEREVVRLGSRKSIAIDVRVLAATNVQLEKAINAGHFREDLYYRLDVVSLELSPLRERPGDIL PLTRHFIDAYSQRLGYGPITISREAEHKLKSYSWPGNIRELENVIHHTLLICRNGVIERDDLRLSNMRIERQDDSQHGTDNSAEALLARAFQKLFEEQAG ALHEKVEDALLRAAYRFSHYNQVHTANLLGLSRNVTRTRLIKIGELAVNKRRPGENVQGERMLHLSI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site