Pseudomonas fluorescens SBW25, PFLU1940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU1940
Name
Replicon chromosome
Genomic location 2114295 - 2115299 (- strand)

Cross-References

RefSeq YP_002871572.1
GI 229589453
Entrez 7821931
INSDC CAY48185.1
UniParc UPI00019DA499
UniProtKB Acc C3K6P6
UniProtKB ID C3K6P6_PSEFS
UniRef100 UniRef100_C3K6P6
UniRef50 UniRef50_A5V6L3
UniRef90 UniRef90_C3K6P6

Product

Feature Type CDS
Coding Frame 1
Product Name
putative ornithine cyclodeaminase
Synonyms
Evidence for Translation
Charge (pH 7) -2.51
Kyte-Doolittle Hydrophobicity Value 0.225
Molecular Weight (kDa) 34951.6
Isoelectric Point (pI) 5.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 255 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001807 (773 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU1940

Human Homologs

References

No references are associated with this feature.