Pseudomonas fluorescens SBW25, PFLU1844
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG (InterPro) | 00592 | alpha-Linolenic acid metabolism | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
| KEGG (InterPro) | 00360 | Phenylalanine metabolism | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
| KEGG (InterPro) | 00903 | Limonene and pinene degradation | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
| KEGG (InterPro) | 00061 | Fatty acid biosynthesis | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
| KEGG (InterPro) | 00362 | Benzoate degradation | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF03061 | Thioesterase superfamily | IPR006683 | Thioesterase domain | 51 | 128 | 3.7E-16 |
| CDD | cd03443 | PaaI_thioesterase | - | - | 24 | 137 | 1.02212E-33 |
| NCBIfam | TIGR00369 | JCVI: hotdog fold thioesterase | IPR003736 | Phenylacetic acid degradation-related domain | 22 | 136 | 2.7E-36 |
| Gene3D | G3DSA:3.10.129.10 | Hotdog Thioesterase | - | - | 1 | 144 | 3.1E-63 |
| SUPERFAMILY | SSF54637 | Thioesterase/thiol ester dehydrase-isomerase | IPR029069 | HotDog domain superfamily | 18 | 143 | 4.7E-32 |
| PANTHER | PTHR43240 | 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 | - | - | 5 | 138 | 1.3E-28 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.