Pseudomonas fluorescens SBW25, PFLU1465 (nadB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009435 NAD biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46977
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008734 L-aspartate oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00760 Nicotinate and nicotinamide metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0
UniPathway UPA00253 NAD(+) biosynthesis InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0
KEGG (InterPro) 00250 Alanine, aspartate and glutamate metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.58.100 - - - 425 534 8.9E-48
PIRSF PIRSF000171 SDHA_APRA_LASPO - - 1 532 2.5E-32
FunFam G3DSA:1.20.58.100:FF:000002 L-aspartate oxidase - - 426 534 4.4E-49
SUPERFAMILY SSF46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily 425 526 1.7E-31
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 355 377 1.2E-8
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 9 28 1.2E-8
FunFam G3DSA:3.90.700.10:FF:000002 L-aspartate oxidase - - 248 361 2.8E-53
SUPERFAMILY SSF56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily 238 353 4.34E-43
Pfam PF02910 Fumarate reductase flavoprotein C-term IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal 441 520 8.5E-14
FunFam G3DSA:3.50.50.60:FF:000060 L-aspartate oxidase - - 8 262 4.3E-113
NCBIfam TIGR00551 JCVI: L-aspartate oxidase IPR005288 L-aspartate oxidase 6 520 0.0
PANTHER PTHR42716 L-ASPARTATE OXIDASE IPR005288 L-aspartate oxidase 5 530 0.0
Coils Coil Coil - - 453 473 -
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 5 448 1.39E-70
Gene3D G3DSA:3.90.700.10 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily 248 361 0.0
Pfam PF00890 FAD binding domain IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain 8 392 1.1E-102
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 8 403 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.