Pseudomonas fluorescens SBW25, PFLU1379 (acrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AACTGGAAAAAGCCGGCGCCAATGCCGCCAAGGTCAAGCTGACCCTGGAAGACGGCAGCGACTACGGCCAGGACGGCAAGCTGGAGTTCTCCGAAGTGTC GGTCGACCAGACCACCGGTTCCGTGACCCTGCGCGCAGTGTTCCCCAACCCTGACCACACCCTGCTGCCGGGCATGTTCGTGCACGCCCAGTTGCAAGCC GGCGTGAACAGCAAGGCCATCCTGGCGCCACAGCAGGGCGTAACCCGCGACCTCAAGGGCACCCCGACGGCGCTGATCGTCAATGCCGACAACAAGGTCG AGCAGCGTGAACTGGTGGCCAACCGTACCGCCGGCGCCTACTGGCTGGTGGAAAAAGGCTTGAACGCCGGTGACCGTGTGATCACCGAAGGCTTGCAGTA CGTCAAGCCGGGCGCCGAGGTCAAGGTCAAGGAGGCTGACAACGCCAAGCCTGCCGGTACTGCCGCTCCTGCTGCCGCTGCTGGCAAAGGGGAGTAATCC
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| DNA Sequence for Gene |
>PFLU1379
|acrB
ATGTCGAAATTTTTTATCGACCGTCCCATTTTCGCCTGGGTAATTGCCCTGGTGATCATGCTGGTCGGGGCACTGTCGATCTTGAAGTTGCCCATCAACC AGTACCCGGCCATCGCGCCAACCGCCATCGATATCCAGGTGACCTACCCAGGCGCGTCCGCACAAACCGTGCAGGACACCGTGGTGCAGGTGATCGAGCA ACAACTCAACGGTATCGACAACCTGCGTTATGTCGCCTCGGACAGTAACTCCGACGGCAGCATGACCATCACCGCGACGTTCAACCAGGGTACCAACCCG GACATCGCCCAGGTTCAGGTGCAGAACAAGCTGAACCTGGCGACGCCGCTGTTGCCGCAAGAAGTGCAGCAGCAGGGTATCCGCGTCACCAAGTCGGTGA AGAACTTCCTGATGGTGATTGGTCTGGTGTCGGAAGACGGCAGCATGACCAAGGACGATCTGTCCAACTACATCGTGTCCAACATCCAGGACCCGATCTC GCGGACCGCGGGTGTGGGTGACTTCCAGGTCTTCGGCTCGCAGTACGCCATGCGTATCTGGCTGGATCCGGCCAAGCTGAACAACTTCCAGCTGACCCCG GTCGACGTCAGCACCGCCATCTCCGCGCAGAACGTCCAGGTCGCCACCGGTCAATTGGGCGGCCTGCCTGCCCTGCCCGGCAACCAGCTGAACGCAACCA TCATCGGCAAGACCCGTCTGCAGACGGCCGAGCAATTCGGCAACATCCTGATGAAGGTCAATGCCGACGGTTCCCAGGTTCGCCTGCATGACATCGCCCG TATCGAACTGGGCGGCCAGAACTACAGCATCAGCGCGCAGTTCAACGGAAACCCGGCTTCCGGTATGGCGATCAAACTGGCTTCCGGCGCCAACGCCCTG GACACCGCCAAGGCCATCCGTGCCACCGTGGCGTCCCTGGAGCCGTTCTTCCCGCCAGGCATGAAGGCGGTGGTGCCGTATGACACCACGCCTGTTGTGA CCGAATCGATCTCAGGTGTAGTGCACACCCTGGTCGAAGCGATCGTGCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAGAACTTCCGCGCCACCATCAT CACCACCATGACCGTACCGGTGGTATTGCTGGGTACCTTCGGGATCCTGGCGGCGTTCGGTTTCACCATCAACACCTTGACCATGTTCGGCATGATCCTG GCCATCGGCTTGCTGGTGGACGATGCCATCGTCGTGGTGGAAAACGTCGAGCGGGTCATGGCCGAGGAACACCTGTCGCCCAAGGAGGCGACGGTCAAGT CCATGGGCCAGATCCAGGGCGCCCTGGTGGGTATTGCCCTGGTGCTGTCGGCGGTACTGCTGCCCATGGCATTCTTCGGCGGCTCTACCGGTGTGATCTA CAAACAGTTCTCCATCACCATCGTTTCGGCCATGGCGTTGTCGGTACTGGTTGCGCTGATCTTCACCCCGGCCTTGTGCGCCACCATGCTCAAGCCGATC GACCCGGAAAAACACGGCCAACCCAAGCGTGGGTTCTTCGGCTGGTTCAACCGCACCTTCGACCGTGGCGTACTGAGCTACGAGCGCGGCGTGGGCAACA TGATCAAGCACAAGATCCCGGCGTTCCTGGTGTACGCGCTGATCTTCGCCGGCATGATCTGGCTGTTCATGCGCATTCCTGCCGCGTTCCTGCCCGATGA AGACCAGGGCGTGATCTTTGCCCAGGTGCAGACGCCTGTAGGCTCTTCGGCTGAACGTACGCAGAAAGTCATCGATGACATGCGTAGCTACCTGCTCAAT GACAAGGAAGGCGAGCCGGGCGAAGGCAAAGGCGTGAAATCGGTGTTTACCGTCAACGGCTTCAACTTCGCCGGTCGTGGCCAAAGTTCGGGCCTGGCCT TCGTGATGCTCAAGCCGTGGGATGAACGCGATGCGTCCACCTCGGTATTTGAAATCGCCAAGCGCGCCCAGGGCTACTTCATGCAGACATTCCAGGACGC CATGGTATTTGCCATCGTTCCACCGTCTGTACTGGAACTGGGCAACGCCACCGGTTTCGATGTGTTCCTGCAAGACCAGGGCGGTGTCGGCCATGAGAAG TTGATGGCGGCCCGTAACCAGTTCCTGGGCATGGCGGCCCAGAGCAAGATCCTGGCCGGTGTGCGCCCCAACGGCGTAAACGATGAGCCGCAATACGAGC TTACCGTCGACGACGAGAAGGCCAGCGCCCAAGGCATCACGCTGTCGAACATCAACCAGACCCTGGCAATTGCCCTGGGTGGCAGCTACGTCAACGACTT CATCGACCGTGGTCGAGTGAAGAAGGTGTACGTGCAAGGTGAAGCCGCCAGCCGCATGTCGCCTGAAGACCTGAACAAATGGTACGTGCGCAGCGACTCC GGGAAGATGGTGCCGTTGTCGGCCATCGCGTCGGGCAAGTGGATCTTCGGTTCGCCGAAACTCTCGCGCTACAACGGGGTAGCGGCGATGGAAATCCTCG GCACTCCGGCACCGGGCTACAGTACCGGTGACGCCATGGCCGAAGTCGAACGTATCGCCAAGCAACTGCCTGCGGGCATTGGTTATGCGTGGACCGGCCT GTCGTACGAAGAACGTTTGTCCGGCTCCCAGGCACCTGCGTTGTACGCCTTGTCGCTGCTGGTGGTGTTCCTGTGCCTCGCAGCACTGTACGAAAGCTGG TCGATCCCGATTGCGGTCGTACTGGTCGTGCCACTGGGTGTCGTGGGCGCGTTGATCGCGACCAGCATGCGTGGGTTGTCCAACGACGTGTTCTTCCAGG TGGGCCTATTGGTGACGGTGGGCCTGGCGGCGAAGAACGCCATCCTGATCGTGGAATTCGCCAAAGAACTCCACGAACAAGGCAAAGGCATCGTCGAGGC GGCCATCGAGGCGTCCCGCATGCGTCTGCGGCCGATCATCATGACGTCGATGGCGTTCATCCTCGGCGTACTGCCGCTGGCGATCTCCTCGGGCGCCGGT TCAGGCAGCCAGCACGCAATCGGTACTGGCGTAATTGGCGGTATGATCACGGCCACTGTGTTGGCGATCTTCTGGGTACCGTTGTTCTTCGCAACCGTGT CCGCCATCGGCGACCGTAAACCGAAAGAAACCAAGCAAACTCCTAAAGAGGCTGGCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAAGTCGCTACTTTCCCTAGCCGTCACGGCATTCGTGCTCAGTGGCTGCTCGCTGATACCTGACTACCAGCGCCCTGAGGCGCCGGTAGCGGCACAGTT CCCGCAGGGGCCGGCGTATTCGTCGGCCCAGGCGCCGAGCCAGGCCGCTGCCGAGCAGGGCTGGAAGCAGTTTTTCCATGACCCTGCCCTGCAACAGCTG ATCCAGACCGCACTGGTGAACAACCGTGACCTGCGCGTCGCGGCCCTGAACATCGACGCGTATGCCGCGCAGTACCGCATCCAGCGTGCCGACCTGTTCC CGGCCGTGTCGGCCAATGGCAGCGGCAGCCGCCAGCGTGTGCCGGCACGTGCCTCGCAGACCGGCGAAGCGAACATCACCAGCCAGTATTCGGCCACCCT CGGGATCAGCTCCTATGAGCTGGACCTGTTCGGCCGTGTGCGCAGCCTGAGTGAAGAAGCGCTGCAGAAGTACTTCGCCACTGAAGAAGCACGCCGCAGC
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| Amino Acid Sequence |
>acriflavine resistance protein B
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPAIAPTAIDIQVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVASDSNSDGSMTITATFNQGTNP DIAQVQVQNKLNLATPLLPQEVQQQGIRVTKSVKNFLMVIGLVSEDGSMTKDDLSNYIVSNIQDPISRTAGVGDFQVFGSQYAMRIWLDPAKLNNFQLTP VDVSTAISAQNVQVATGQLGGLPALPGNQLNATIIGKTRLQTAEQFGNILMKVNADGSQVRLHDIARIELGGQNYSISAQFNGNPASGMAIKLASGANAL DTAKAIRATVASLEPFFPPGMKAVVPYDTTPVVTESISGVVHTLVEAIVLVFLVMFLFLQNFRATIITTMTVPVVLLGTFGILAAFGFTINTLTMFGMIL AIGLLVDDAIVVVENVERVMAEEHLSPKEATVKSMGQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMALSVLVALIFTPALCATMLKPI DPEKHGQPKRGFFGWFNRTFDRGVLSYERGVGNMIKHKIPAFLVYALIFAGMIWLFMRIPAAFLPDEDQGVIFAQVQTPVGSSAERTQKVIDDMRSYLLN DKEGEPGEGKGVKSVFTVNGFNFAGRGQSSGLAFVMLKPWDERDASTSVFEIAKRAQGYFMQTFQDAMVFAIVPPSVLELGNATGFDVFLQDQGGVGHEK LMAARNQFLGMAAQSKILAGVRPNGVNDEPQYELTVDDEKASAQGITLSNINQTLAIALGGSYVNDFIDRGRVKKVYVQGEAASRMSPEDLNKWYVRSDS GKMVPLSAIASGKWIFGSPKLSRYNGVAAMEILGTPAPGYSTGDAMAEVERIAKQLPAGIGYAWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESW SIPIAVVLVVPLGVVGALIATSMRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELHEQGKGIVEAAIEASRMRLRPIIMTSMAFILGVLPLAISSGAG SGSQHAIGTGVIGGMITATVLAIFWVPLFFATVSAIGDRKPKETKQTPKEAGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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