Pseudomonas fluorescens SBW25, PFLU1038
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR42718 | MAJOR FACILITATOR SUPERFAMILY MULTIDRUG TRANSPORTER MFSC | - | - | 11 | 485 | 1.3E-83 |
| Pfam | PF07690 | Major Facilitator Superfamily | IPR011701 | Major facilitator superfamily | 26 | 407 | 1.4E-47 |
| Gene3D | G3DSA:1.20.1720.10 | Multidrug resistance protein D | - | - | 22 | 239 | 2.6E-45 |
| CDD | cd17321 | MFS_MMR_MDR_like | - | - | 25 | 441 | 4.52343E-63 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | IPR036259 | MFS transporter superfamily | 270 | 446 | 3.0E-12 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | IPR036259 | MFS transporter superfamily | 20 | 500 | 3.79E-56 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.