Pseudomonas fluorescens SBW25, PFLU1022
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGACTTTGCCCTGGCCCATCCGTTGTGGTTCCTCAAAGGCTCTTCGGTGACCGCGCCGCTGGTGGACGCGTATCCCGCCGTCGCCGCCTGGCTCGACCGG GTACTGAGTTTTGGTCATGGCACCGCCAGTGAGATGAGCGCCGAGCACGCCTTGGACGTGGCGCGCAACGCCACCCCAGCGGCGTTGCCCGATGAAGTGT TCGAGGACTTGAATGGCTTCAAGGCCGGCCAGCTGGTGACCCTTTCGGCCACCGACTACGGCACTGACCCCGTGGCCGGTGAGCTGCTGTTTGTCGGGCG TGAAACCCTGATCCTGCGCCGTAGCGATGAGCGCGCGGGCACCGTGCATGTGCATTTCCCACGCATGGGCTTTCGCATTCAGGCGCACTAACGAAAAATA TTTGCAAATAAAGGTGAGGTAAATCCACCGCTCAACCGTGTAGTGCTTGAAACTGCGATCTATTCGCATTAACAGCGTTTTCTACACGGGTTCTCACAGC
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| DNA Sequence for Gene |
>PFLU1022
ATGAAGTCGACGGCGGGCGGTTGGATAAAACAGTGGCTGGGAGCCTCGGCATTGGCAGTCTCGGGGCTGGCGTTGTTGCCCCTGAGCGTGGCGCAGGCGC AGGAGCAGCAAAGCGCCCAGTTCAACTTTGCCCTGGCAGCCAAGCCGCTGCCCCAGGCCCTGAGCGATTTTAGCCGGGTCACTGGAATCAGCGTGATCTA CACCGATGAAGCGCCCTACGGCCTGAGCGCCCCGGCGGTCAGCGGCCAGATGAGCGCAAACCAGGCCCTGCAACGGTTGCTGAGCAACACCGGCTTTACC TTCCGCCAGATCGACGCCCGTACCCTGGCCCTTGAGCCGGTGCCCACCGACGGCGCGGTGAACCTCGGCGCCACCACGATCAGCGGCGTTGGCCAGCAGG CCCAGGACAGCACCAGCTACCAGCCACCGCCCACCAGTTCGGTGATGCGCTCGGGTGGCTTGCTGCTGGAAACCCCGCAGACTGTCAACGTCGTGCCCGC CCAAGTGCTGCGCGACCAGACCCCGCGCAACCTGGATGACGCCCTGGGCAACATCAGTGGCATCACCCAGGCCAACACCCTGGCCAGTACCCAGGACGCG GTGATGCTGCGTGGCTTTGGCGACAACCGCAACGGTTCGATCATGCGCGATGGCATGCCGATCGTGCAGGGGCGTGCGTTGAACGCTACGGCGGAGCGGG TCGAAGTCCTCAAGGGGCCAGCATCCTTGCTGTACGGCATCCAGGACCCGGGCGGCGTGGTGAATATCGTCAGCAAAAAGCCTGAGCTGGTCCAGTCCAC CGCCCTGACCGTGCGCGGCTCCACCTTCGGTGATGGCAAGAACGGTAGCGGCGGCAGCCTAGACACCACCGGCCCGATTGGCGACAGCGGCCTGGCCTAT CGGCTGATCGTCGACCATGAAGACGAGGATTACTGGCGCAACTTCGGCACCCACCGCGAGAGCCTGATCGCGCCGTCGCTGGCCTGGTATGGCGACACCA CCAAGCTGTTGTTCGCCTACGAGCACCGCGAGTTTCTCACGCCGTTCGACCGTGGCACCGCCATCGACAAGTCCAACCACCCGTTGGACATCCCGGCCAC CCGTCGGCTGGATGAACCCTTCAACAACATGGAAGGGCGGTCCGACCTGTACCGCTTTGAAGCCGATCACGACCTCAACGATGACTGGAAGGCCCATTTC GGCTACAGCTGGAACCGCGAAACCTACGACGCCAGCCAAGTGCGTGTGAGTGCGGTGAATGACAACGGCACCCTGACCCGCAGAATGGACGGCACCCAGG GCGCGATCACCACCGACCGTTTCACCACGGCCAGCCTGGAAGGCAAGGTCAAGCTGCTGGGCATGCAACATGACCTGGTGTTCGGCCTGGATGACGAATA CCGCAAGATCTACCGCGCCGACCTGATTCGCCAGGGCTCGCGGGGCACCTTCAACTACAACAACCCGGTGTACGGCAATGAAGTGGCGGGCACTACCGTC AGCGCCGTCGACAGCGCCCAGACCGACCTGCTGCGCAGCGACTCGCTGTTCTTCCAGGATGCCATCCACCTCAACGACCAGTGGATTTTTGTCGCCGGTG CGCGCTATCAGATGTACGACCAATACGCCGGCAAGGGCGTACCGTTCAAGGCCAACACCAACGGCAACGGCCAGGCCTGGGTGCCGCGTGCGGGCCTGGT GTATCGCTACACCGATGAATTGTCGTTCTATGGCAGCTACACCGAGTCGTTCAAACCCAACTCCACCATCGCCGCCTTGAACGATGGCAGCACCTTGACC GGCGACCTCACGCCTGAGGAATCCAAGTCCTGGGAACTGGGGGCCAAGCTCGACATCCCTGGGCGCATCACCGCCAGCGCGGCGCTGTTCACCATCGACA AGCGCAATGTGCTGGTGTCGGTCGGTTCCGGCGCGAATACGATCTACAGCATTGCCGGCCAGGTGCGCTCACGCGGCCTTGAACTGGACGCCACCGGCCA ATTGACCGACAAGTGGAGCGTGATCGGCAGTTATGCCTACACCGACGCCGAAGACATCAAGGACAACGACCCGACGCTGGAGGGCAACCGCCTGCAGAAC GTGGCCAAGCACACCGGCTCGCTGTCGGTGGCCTACGACTTTGGCAACATCTTTGGTGGCGACCAGCTGCGCGTGGGGACCGGCGCACGGTATGTCGGCG AGCGCGCCGGCGATGCGGCCAACGATTTCAACTTGCCGGGTTATACCGTGGCGGACGCATTTGCTACCTACGACACTAAAATTGATGGGCAGAAGGTCAA GTTCCAACTCAACGTGAAGAACATGTTTGATCGCGTCTACTACACCTCGGCAGCCAGCCGGCTGTTTGTGTCCATGGGCGATGCGCGACAGGTATCGGTG TCGAGCACCCTGGAATTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGTAGGACATGACGCCTTGTGGCAAGCCCGCTCGCCACAGGGGGAGGGAGCTGGTAGCGTTGCCGCCACTGACAGCTTTGCGGACAACGCTACTGATGTA CTTTGGAAAATGCTTACACACCCGCGGCATGCTGGTTGGCTTGAGCCTTTTGCTGGGGGGCTGCGCGAGTGTTTCCCAGACCTCCACCCCAGGCACCCTC GATCACCTGATGGCCGACCCGGCGCTCAACGGCGCCACTGTCTCCCTGATGGTGCGTGACGCCCGCAGCGGCAGCACGCTCTACCAACACAACCCGCGAA CACGGGTCATTCCTGCGTCCAACCTCAAATTGCTCACCACTGCGGCGGCGATGGATGTGCTGGGGCCGCAATACCGGTTTTCCACTCAACTGCTGGGTAA CGGCACCCAGCAGGGCGAGCGCCTCAGCGGCAACCTCTATTTGCGCGGCTTGGGCGACCCGACCACGCAATTCGCCGACTACCAGGCATTGGCGGCACAA
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| Amino Acid Sequence |
>putative ferric siderophore receptor
MKSTAGGWIKQWLGASALAVSGLALLPLSVAQAQEQQSAQFNFALAAKPLPQALSDFSRVTGISVIYTDEAPYGLSAPAVSGQMSANQALQRLLSNTGFT FRQIDARTLALEPVPTDGAVNLGATTISGVGQQAQDSTSYQPPPTSSVMRSGGLLLETPQTVNVVPAQVLRDQTPRNLDDALGNISGITQANTLASTQDA VMLRGFGDNRNGSIMRDGMPIVQGRALNATAERVEVLKGPASLLYGIQDPGGVVNIVSKKPELVQSTALTVRGSTFGDGKNGSGGSLDTTGPIGDSGLAY RLIVDHEDEDYWRNFGTHRESLIAPSLAWYGDTTKLLFAYEHREFLTPFDRGTAIDKSNHPLDIPATRRLDEPFNNMEGRSDLYRFEADHDLNDDWKAHF GYSWNRETYDASQVRVSAVNDNGTLTRRMDGTQGAITTDRFTTASLEGKVKLLGMQHDLVFGLDDEYRKIYRADLIRQGSRGTFNYNNPVYGNEVAGTTV SAVDSAQTDLLRSDSLFFQDAIHLNDQWIFVAGARYQMYDQYAGKGVPFKANTNGNGQAWVPRAGLVYRYTDELSFYGSYTESFKPNSTIAALNDGSTLT GDLTPEESKSWELGAKLDIPGRITASAALFTIDKRNVLVSVGSGANTIYSIAGQVRSRGLELDATGQLTDKWSVIGSYAYTDAEDIKDNDPTLEGNRLQN VAKHTGSLSVAYDFGNIFGGDQLRVGTGARYVGERAGDAANDFNLPGYTVADAFATYDTKIDGQKVKFQLNVKNMFDRVYYTSAASRLFVSMGDARQVSV SSTLEF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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