Pseudomonas fluorescens SBW25, PFLU0953 (lpxC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GGGTGAGTACTCCGACGTGGGTAGCATCATCGAAGCCTTCGCTTCCGAGCACGCGATGGTCAAAGTCGGTACCGTGATCGATCCGGACATGCGCGATGAA CTGCACGTGACTGTGGTTGCGACCGGCCTGGGTGCCAAAATCGAGAAGCCTGTGAAGGTTATCGACAACACCCTGCATAACAGCCAAGCCAGCCACGCCA GCCAATCGGCTGCCGCTCCAGCGCCTTCGCGCCAGGAACTGCCGTCGGTGAACTACCGTGACCTGGACCGTCCGACCGTGATGCGCAACCAGGCTCAGGC CGGTGCTGCGGCGTCCCGTAGCCCGAATCCGCAAGATGATCTGGACTACCTGGACATCCCGGCATTCCTGCGTCGTCAGGCCGATTAATGGAATGTATCA GGGCTATGAAGGTGATTGGTGTTCAGCAAAGGTCTGGTCTGCTATTATCGCCAGCCTTTGTTGATACCAGTTCGCAATTTGCGCTGAAGCGGTCCAAGCC
DNA Sequence for Gene
>PFLU0953 |lpxC
ATGATTAAACAACGCACTCTGAAGAATATTATTCGTGCCACAGGTGTAGGTCTGCACTCCGGGGAGAAGGTATACCTGACCCTCAAGCCTGCACCTGTCG ACACCGGCATCGTGTTTGTGCGTGCCGACCTGGACCCTGTGGTGCAGATACCTGCTCGCGCGGAAAACGTTGGCGAAACCACGATGTCGACCACATTGGT CAACGGTGACGTCAAGGTGGACACGGTGGAGCACTTGCTCTCGGCCATGGCCGGTTTGGGCATCGATAACGCCTACGTCGAGCTCTCCGCGTCCGAAGTC CCGATCATGGATGGCAGCGCTGGACCCTTCGTATTCTTGATTCAATCTGCCGGCCTGGAAGAACAGGACGCAGCCAAGAAGTTCATTCGCATTCTGCGGG AAGTGACAGTAGAGGACGGCGACAAGCGCGCCACCTTCGTCCCGTTCGAAGGCTTTAAAGTGAGCTTTGAGATCGATTTCGATCACCCGGTATTCCGTGA CCGCACCCAAAGTGCAAGCGTGGATTTTTCCAGCACTTCGTTCGTAAAAGAAGTCAGCCGCGCCCGTACCTTTGGTTTCATGAGTGACATCGAGTACCTG CGCAAGCACAACCTCGCACTCGGCGGCAGCGTTGAAAACGCCATTGTGGTCGACGCGGATGGTGTACTGAACGAAGACGGCCTTCGCTACGAAGACGAGT TCGTGAAGCACAAGATCCTCGATGCAATCGGTGACCTCTACCTGCTGGGCAATAGCCTGATAGGCGAGTTCAAAGGCTTCAAGTCGGGCCACGCCCTTAA CAACCAGCTGCTGCGCAAGTTGATTGAGCAGACAGACGCTTGGGAAGTCGTGACCTTCGAAGATGCCAGCACCGCACCGATCTCTTACATGCGTCCCGTT GCGGCGGTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTAACAACTCTCTTTCTTTAGTTTTGAAAGGCCACCTTCGGGTGGCCTTTTTTTTTTGCTTGAATTTCAGTGCCTTGTATTTATCCGGGCGGCGATGGAG CGTCGAGGTGGAAATGTATTTGTGGTCGGGTAGGGGTTTATGTTCCGGTCGCCAGGTGTTGAATTTTTTTGCAATAGTTAGCTGGTTTTCTTTATTCAAG CTGTCTGAGTAATGTAGTGCTGTCGTACTGTTTTTCGATGTGAAGCATGGATGCTCTGAATTGTGGTTTCCACGAATTTCGGAGTGATGTTTATGTTTAT GATTTTAGAGCTTGGCAGATTGTTCGATATGAACTTCGTCGGTTATGCCGGGAGTGTTCGAACATGAGTAAAGAAGACGCTATCTTGCACTCGTTCGGTC TGAAGGTCGGTCTGCCCGGGCTGAAGTTTGATGCTTCCCGCGCTTGCCAGTTGAGAGTTGAGGGGCTCAAGCTGGCAATTTATGATAATCGAGTCAGAAA
Amino Acid Sequence
>UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFVRADLDPVVQIPARAENVGETTMSTTLVNGDVKVDTVEHLLSAMAGLGIDNAYVELSASEV PIMDGSAGPFVFLIQSAGLEEQDAAKKFIRILREVTVEDGDKRATFVPFEGFKVSFEIDFDHPVFRDRTQSASVDFSSTSFVKEVSRARTFGFMSDIEYL RKHNLALGGSVENAIVVDADGVLNEDGLRYEDEFVKHKILDAIGDLYLLGNSLIGEFKGFKSGHALNNQLLRKLIEQTDAWEVVTFEDASTAPISYMRPV AAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site