Pseudomonas fluorescens SBW25, PFLU0824

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0824
Name
Replicon chromosome
Genomic location 930709 - 932106 (- strand)

Cross-References

RefSeq YP_002870488.1
GI 229588369
Entrez 7819800
INSDC CAY47092.1
UniParc UPI00019D9C47
UniProtKB Acc C3K5B7
UniProtKB ID C3K5B7_PSEFS
UniRef100 UniRef100_C3K5B7
UniRef50 UniRef50_A0A0B7D6X5
UniRef90 UniRef90_C3K5B7

Product

Feature Type CDS
Coding Frame 1
Product Name
putative outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -0.32
Kyte-Doolittle Hydrophobicity Value -0.461
Molecular Weight (kDa) 50913.8
Isoelectric Point (pI) 6.90

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004088 (487 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0824

Human Homologs

References

No references are associated with this feature.