Pseudomonas fluorescens SBW25, PFLU0790 (pilD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TGGCGCCAAGCGTATCGCACCTTCCCTGATTTTCGTCTGCGGGTAGACGCCGGTTTGTTGAAAGCGCCCCTGGCAGGCAAACTGCTGAAAAAATCCGCAG TGGCCCGCTACGCCCGTACGCTTTCCACCACCTTCGCCGCCGGTGTTCCATTGGTGCAGGCGCTGGATTCAGTGGCCGGCGCCGCAGGGTCGGGGCCATT CAGACAGGCAATCGAGCACATGCGACATGATGTATCCACCGGTATGCAATTGAATCAATCCATGGCCGCCAGCGGCCTGTTTCCCGGCATGGCGATCCAG ATGACGGCCATCGGCGAAGAGTCGGGCACGTTGGACCGCATGCTGGAAAAAGTCGCCAACCATTACGAGGCTGATGTGGACAACCTGGTCGATAACCTCA CCAGCCTGATGGAACCGCTGATCATGGTGGTATTGGGGGGCATCGTCGGCGCGCTGGTGATCGCCATGTACCTGCCGGTCTTTCAGTTGGGGAGCGCGTT
DNA Sequence for Gene
>PFLU0790 |pilD
TTGAACCTGCTATTGGTTGAGCAGCCCTGGGCTTTTGTGGCGATGGCCGGGGTGCTGGGGCTGATCGTCGGCAGTTTTCTCAACGTGCTGGTGTGGCGCC TGCCGAAAATGCTCGAACGGGAATGGCGCGCCCAGGCCCACGAAGTGCTCGGCTTGCCCGCTGAGCCTGCCGGGCCGACCTACAACCTGATGCACCCCAA CTCCTGCTGCCCGCACTGCAACCATCCGATACGCCCATGGGAAAATATCCCGTTGCTCAGTTACCTGTTTCTGCGCGGCCGCTGCGCCCATTGCCAAGGC CCGATCAGCGCCCGCTATCCACTCACTGAACTGGCGTGCGGGTTGATCTCGGCCTGGGTGGCCTGGCATTTCGGCTTTGGCTGGCAGGCGGGCGCGATGC TGGTGCTGAGTTGGGGCTTGTTGGCGATGAGCCTGATCGATGCCGACCATCAACTGTTGCCGGATGCGCTGGTGATGCCGCTGCTCTGGCTGGGACTGAT CGTCAACGCGCTTGGCCTGCTGACGACGCTACCCGATGCCCTCTGGGGCGCGGTTATCGGGTACATGAGCCTGTGGAGCGTATTCTGGCTGTTCAAGCTG GCCACCGGCAAGGACGGCATGGGCCACGGCGACTTCAAGCTGCTGGCACTGCTCGGTGCCTGGGGTGGCTGGCAGATCCTGCCGATGACACTGCTGATAT CGTCGCTGGTCGGGGTGTTCGTGGGCTTGATCCTGATGCGCCTGCGCAAGGCCCGGGCGTCGACACCGATGCCGTTTGGTCCGTATCTGGCAATTGCCGG CTGGATTGCATTGCTCTGGGGTGGTCAAATAACCGACTTCTATTTGCAGTCTGTCGGTTTCAGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACTTCTGTTGCAACACCCTGGATTCTAGGCCTCACCGGCGGCATCGGCAGCGGTAAAAGCGCAGCGGCCCAGCACTTTATCGACCTGGGGATCGACCT GGTGGACGCCGACCACGCGGCGCGCTGGGTGGTCGAACCTGGCCGGCCGGCACTGGCGCGCATCGCCGAGCATTTTGGTGCCGGCGTGCTGCAGCCGGAC GGCCAGTTGGACCGAGGGGCATTGCGCAAGCTGATCTTTGAAGTACCCGAAGAGCGCCGCTGGCTCGAAGCCTTGCTGCACCCGCTGATTGGCGATGAGA TTCGTAGCCATCTGGCGCGCGCGAAGTCGCCTTACGCGATACTGGTGTCGCCGCTGCTGATCGAGTCCGGCCAGTACAGCATGACCCAGCGCATCCTGGT GATCGACGTGCCGCAATCGCTGCAGATTCAGCGTACCCTGCAGCGCGACGGCATCAGCGAACAACAGGTGCAGGCGATCCTCAAGGCGCAATCCAGCCGC
Amino Acid Sequence
>type IV prepilin-like proteins leader peptide processing enzyme
MNLLLVEQPWAFVAMAGVLGLIVGSFLNVLVWRLPKMLEREWRAQAHEVLGLPAEPAGPTYNLMHPNSCCPHCNHPIRPWENIPLLSYLFLRGRCAHCQG PISARYPLTELACGLISAWVAWHFGFGWQAGAMLVLSWGLLAMSLIDADHQLLPDALVMPLLWLGLIVNALGLLTTLPDALWGAVIGYMSLWSVFWLFKL ATGKDGMGHGDFKLLALLGAWGGWQILPMTLLISSLVGVFVGLILMRLRKARASTPMPFGPYLAIAGWIALLWGGQITDFYLQSVGFR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site