Pseudomonas fluorescens SBW25, PFLU0603 (cobL)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009236 | cobalamin biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02467
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF53335
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0008168 | methyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.1010.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0008276 | protein methyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02467
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| UniPathway | UPA00148 | adenosylcobalamin biosynthesis | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd11644 | Precorrin-6Y-MT | IPR012818 | Precorrin-6Y methyltransferase | 8 | 203 | 4.46314E-62 |
| Pfam | PF00590 | Tetrapyrrole (Corrin/Porphyrin) Methylases | IPR000878 | Tetrapyrrole methylase | 5 | 185 | 5.9E-19 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | 212 | 400 | 1.0E-60 |
| CDD | cd02440 | AdoMet_MTases | - | - | 252 | 346 | 7.62285E-5 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | 210 | 377 | 3.38E-28 |
| PIRSF | PIRSF036428 | CobL_MTase | IPR006365 | Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase | 1 | 401 | 0.0 |
| SUPERFAMILY | SSF53790 | Tetrapyrrole methylase | IPR035996 | Tetrapyrrole methylase superfamily | 4 | 204 | 4.19E-38 |
| Coils | Coil | Coil | - | - | 401 | 401 | - |
| Gene3D | G3DSA:3.40.1010.10 | - | IPR014777 | Tetrapyrrole methylase, subdomain 1 | 4 | 102 | 4.0E-12 |
| PANTHER | PTHR43182 | COBALT-PRECORRIN-6B C(15)-METHYLTRANSFERASE (DECARBOXYLATING) | - | - | 3 | 400 | 9.7E-121 |
| NCBIfam | TIGR02469 | JCVI: precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT | IPR014008 | Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit | 230 | 351 | 9.8E-34 |
| NCBIfam | TIGR02467 | JCVI: precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE | IPR012818 | Precorrin-6Y methyltransferase | 7 | 199 | 1.8E-42 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.