Pseudomonas fluorescens SBW25, PFLU0296 (oprQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGGGCAAGGTGGTGGCCGCACAGGCAAAACCGGCAGACAGCAGAACAGAAAGCCCAAGGGTAAGGGGCGTCAGGCGAGGGGCTGGCATGAAGGAATGTA TCCGAATTGTTAGGGAGGAAAACTGCGCGTTAATGGTAATGCTTTGCATTTGCGCAAGTTATGTATTCCCAAACGTACCGGCTTTGAAATGTATTACTAA ATGTGTTTTTTGACGTTTCAGGTGCGGTTTTTTGTCGCTTTTAGAACGGCTAAAGCGCATCGCTTAGAATTATTTCGCCTAAATACAGACGATTCGCGAA ATTGACACATAGTTCCGGGCGCGACTAGGATTGCGCCCAACGCCTGTGGCTAACCGCCATGACTCATCCAATAAAAAAGGCCCGCGGCATGTTCAGTCGT CCGCGGGCCTTCTTTTTTCCGGAATCAGTCGACACCAGAAAAGCGACACGGAGCCTGGTGTCACAGCGCGTACTCAACCAGGAATAAGGAATACAAGAAA
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| DNA Sequence for Gene |
>PFLU0296
|oprQ
ATGTTGAAGCAACGGATGAGTCTGATCGCTCTGGGGATTTTGAGCGCATCGACAGCAATGGCAAACGACCAGGACCAGTCCAAGGGTTTTATCGAAGACA GCCACCTGAACATCGCCGCACGTAACGCCTACATCAGCCGTGACTACAAAAACGGCAAGCAAGACAAAGCCGAATGGGGCCAAGGCTTCATCGGCAAGCT CGAGTCTGGTTTCACCCAAGGCACCGTCGGTGTGGGTGTGGACGTGATTGGCCAATACGCTATCCGTCTGGACGGTGGTAAAGGTCGCGCCGGCGCGGGC GGTATCGACTTCTTCAAACCGGGCAATGGCACCACCGACAACCCTGGCTCGGCACCACACGACCTGGTCAAGGGCGGCGCTGCCGTGAAGTTCCGCGTTT CCAACACCGTGCTCAAGTACGGTGACCAGTTCCCGGCCGTACCTGTGCTGCAGTACGACAACTCCCGTCTGTTGTCGGAAACCTACACCGGTACGTCGAT CGTTTCCAAAGAGATCGCCGGTCTGCAACTGGACGCGGGTCACTTCACCAAAGAAGCGCGCAAGAGCGCGGAAGGCACCGACAGCGGCCGCCTGAAAAGC ATCGACTACATCGGTGGTAGCTACAAATTCACCGAGAGCCTGTCGGCTGCGCTGTATGCCTCTGACATGCAGGACGTGCTGAAGAAGCAATACGTCAACG TCAACTACGTCCTGGCCCTGCCAGAGAAGCAGTCGCTGACGTTTGACTTCAACGGCTACAAAACCAAGCTGGACCGCAGCTTCGCCCTGGAAAACCAGAA AGATGCTGACGCCCGCGACAACAAAATCTGGAGCCTGGGCGCCACGTGGGCCGTTGGCCCGCACAGCTTCACCGTCGCTCACCAGCGCAGCACCGGTGAC ACCGGCTACCTGTACGGCGGCTACCGCAACGCTGGCGGCATCGGCGACGGTGGTAACACCATCCTGCTGGCCAACTCTTACTGGTCTGACTTCAACGGTA AGGACGAGCGTTCGTGGCAACTCGGCTACGGCATCGATTTCGCCACCTTCGGCGTACCGGGCCTGACCTACAACGTCGCCTACGTGCGCGGTACCAACAT CGACGACGGCACCAACCGCGGCGATGGCTCCGAGCGTGAAATCTGGAACCAGTTCAAGTACGTGGTCCAGAGCGGTCCGGCCAAAGACCTGAGCCTGCGT GCTCGTGCCTCGTGGCTGCGCGTCTCCAATAACGCTGACCAGTACAACGTAGGCGGTAACGAAATCCGTCTGTTCGCCGACTACCCGATCAACGTTTTCT AA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGATCTGGCGTCGCGCCTGATGCCAGGCGCTAAAAAACCCCGACTGGTTCGGGGTTTTTTTATGCCCGCCAGTGCGAGACACGTTTGTTACACCACGGC ACTGATGATGTACCCGGCCCCACCTTTATCCCCTCCCGGCGCATGCCTACGGCTTCTTCTATATCCCCCAACTCGCCCTTGCCGAGATGGAAAAGAACAA CGCCGGCCGCATCGTCCACATCACCACCAGCCTGGCTGACCATGCAATCGATGGCGTACCGTCGGTACTTGCCAACCTCACCAAAGGCGGCCTGAACTCA GCGCCCAAATCATTGGCGATTGAATACGCCAAGCGCGGTATCCGAGTGAATGCGGTAAGCCCGGGGATCATCAAGACGCCGATGCATGGCGAGGAAAGCC ATGCTGCGCTGGGGCAAATGCACCCGGTTGGGCACATGGGGGAGGTGAGTGAAATCGCCCAGGCGATTATTTATCTGGAGAATGCGGGGTTCGTGACGGG
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| Amino Acid Sequence |
>outer membrane protein, oprE3
MLKQRMSLIALGILSASTAMANDQDQSKGFIEDSHLNIAARNAYISRDYKNGKQDKAEWGQGFIGKLESGFTQGTVGVGVDVIGQYAIRLDGGKGRAGAG GIDFFKPGNGTTDNPGSAPHDLVKGGAAVKFRVSNTVLKYGDQFPAVPVLQYDNSRLLSETYTGTSIVSKEIAGLQLDAGHFTKEARKSAEGTDSGRLKS IDYIGGSYKFTESLSAALYASDMQDVLKKQYVNVNYVLALPEKQSLTFDFNGYKTKLDRSFALENQKDADARDNKIWSLGATWAVGPHSFTVAHQRSTGD TGYLYGGYRNAGGIGDGGNTILLANSYWSDFNGKDERSWQLGYGIDFATFGVPGLTYNVAYVRGTNIDDGTNRGDGSEREIWNQFKYVVQSGPAKDLSLR ARASWLRVSNNADQYNVGGNEIRLFADYPINVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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