Pseudomonas fluorescens SBW25, PFLU0085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCACAGCAATGGTGTGCTCAGTCGCCTGAAGCCCACCGCCATCGAAGACCATCCGCTGCCAGGCCCCAAGGGCCGGGGGGCGATCCTTGTGCGTTTTG GCGAAGGCCCAGAGGCGCTGGTGGTGGTGATGATGCACCTGGCGTTGGGTGCGCGCACCCGCACGATGCAACTGGCCTACATCCGCGAGCTGATTGGCGG TTACAAACACCAGGTACTGATGGGTGACATGAACACCCATGCCAATGACCTGTTGTTGAATTCTCCGTTGCGCGACCTCGGGCTACTGGCTCCGCAAGCC GAAGCCACATTCCCCAGCTGGCGCCCGCAACGCTGTCTTGACCATATCCTGCTCAGCCCTACCCTCACACTCGAGAGTGTGCAGGTGCTGGCGCAGCCCA TCTCCGATCACCTGCCGGTCGCGGTAGAGATTCGTCTGCCGGGTTCGCTCACGGCTGATGCATTACCCGCGTTGAGCCCCGGCCCTCGCGGACCCCTTGC
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| DNA Sequence for Gene |
>PFLU0085
ATGAGCGACGACGCCCAGCGCTGGAAAGAGAAATACCTCAAAAGCATAGAGCAACAAGAAAAGCTCGAACGCCGTTGGGCAGCCCGCCTCGACCTGCTAC GCCGTGGGCTGGTGCGCAGCACGCTGGCCGCTGAAGGCACCGACCGTGCCGTCGACCAGTGCATGAAGGAAATGCGTGACGTTGTCCGTACAGATGATAT GGACGCCGCCCTCGCCGCCTTGCTGCCGCGCCTGGAAAAAGCCGTGCTGGATTCGGAGCAGCGCCGTGAAACTCGGGTCGACCAGATCAGCACCGCGCTG ACGTCCCTGGTTACCCAGCTGCAAAAGTTGCCATTACCGCGTGAGGTTGCCCGGCCGCTTAAGACGTTCGCCAAGCAGTTGGACGGCCGAGTCAGCCAGG CACGTGAGATCCCCTTGCTGCTCAGCGAGTTGAGTGGCCTGCAGGGCCAGGCGCTGAACAACCTGGAGCCGGACGGCGAAACCACACGCCCAGGGCCGGG GCTTTTGCAGCGCCTGTTTGGTTCCAAAGACGTCGCGACCGAGCCGGAGGCCAGCGAATCGACAGCCCGCCCGGCACCGCAACCCATTGTGGCCAAGCCT GTCGCCGAGCCCCAGCCGCCCGAACAGTCCGAGGAACTGACGCAAGCCTTGCGCGCCTTTGCGCCGCCGCCTCAGGAAAAGGTTGCCTCCGCAGTTGAGT CGGCCGGGCCGGCCAAGGTGGCGGACGCTGTCAGTGAAACGTTTGTATACGAGGCTCCGCCTCAAGCTGAGCCCGTTGAAGCGTCCGTAGTACCCGTAGC GTATGTCGAGCGGGAGCTTCCGACAGAAGAGCCGGCACCGGAAAGCGCCCTCGCCGCTTTTATCGAAACGCCTGACGTTCAGGTCGAAACGCCGGGTGAG ACCACCATCGGCAGCCTGTCGCTCCCTCCTGTGCTGGAGGTCGAGGAGTCCGATCCCGACGAGCTGCAAGCGGACGGCACCTATGCCTTACCTGATTCGC CGGAGCCGTCCTACAGCTCCGTAGCCAAGCATATTGAAGACACTCTGCTCGGGCTGCTGGAGGAGTTGTCGCTACCCGAGCGTCACCGGCCCCAGGCCGA AGCCATGCGTGAGCGTCTGGCGCACGGCCTGAACTGGTACGAACTGCTACCGATCCTCGACGATCTGGCCGTCTTGATGCTGGCAATCACCGACAGCGGC CAGCACGAATTCGAGGCTTACCTCAAGCAGCTCAACGAGCGTCTCGAAGCGTTCCAGGGGCATTTGCAGGTCGCCAGCGACGGCCATGCCGATAGCCGTT CGGCCGCCCGTGAGCTGGACACGCAGATCCGCGAACAGGTCGATGGCTTGCAAAGCAGCGTGCAGGAGGCCGCCGATCTGGAAAGCCTCAAGCACGTATT GGAAAGCCACCTCGAAGGTCTTCTCGGCACCATGGACGAGCACCAGCAGCAGCGTGACCAGCGCGAGCAGGAAACGGCAGCGCGACTGAAAGGCTTGGCC GAGCGGGTTGCCAATATGGAGCAGGAAGCCCAGGGCTATCGCGAGCACTTGGAGGTGCAGCGCCAGAAGGCCTTGATCGATCCGCTCACTGGCCTGCCCA ACCGCGCCGCGTGGAGTGAGCGGCTCGATCACGAGGTCAACGCCTGGCATCAACGGGGCAACAGCCTGTCGCTGGCGATGCTGGACTTGGATCACTTCAA GCGCATCAACGACGGCTACGGCCACCTGGCTGGCGACAGGGTGCTGAAGATCATCGCCAACGTACTGCGCAAGCGCCTGCGGCCGACCGACTTTATCGCG CGTTTCGGCGGTGAGGAGTTCGTGTTGCTGATGCCCGACTCATCCCTCGCGGATGCCCTGGCGGCGGTTGAAGTGTTGCGCGGCGCGATTGAAGCCTGCC CGTTTCACTTCAAGGGGGAGCCGGTAACGATCACTGTGTCCATGGGTGTGGCGCAGTTCCAGCCGGGAGAGCGCAGTGACCTGGCGCTCAAGCGCGCGGA TGCGGCCTTGTACCGGGCCAAGGCCGCAGGCCGAAACCAAGTGCAGGCCGCCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAAATGTTCCATTTTGTAATTTGACGGTTAGGTCACAAGCGGTACGTTACACTGTTGCATTATCGTCTTCAGCGTAACGTCTTCCGTCATGAAATTTTTG TACATTGCCTTTGTGTTTCTTTTCCTTGCGGGCTGCGCCAGCGGCCCTCGCCTGGACACCAACCACCCCTCGGTGAACCACGACAACCGCGTGCAGTTCG TGGTGGTGCATTACACCTCCACCAACCTTGAGCGCTCCCTGGCATTGCTCACCCACGGTCAGGTGAGCAGCCATTATCTGATCGGCGACGATGCCTCAGG CACTATCTACAAGCTGGTGGATGAGAGCCAGCGCGCCTGGCATGCCGGGGAAAGCGAATGGATGGGCCGCACCTGGCTCAACTCCAGCTCCATTGGTATT GAGATCGTGAACCCTGGCTACAAGGACACGCCGACAGGCCGCTTGTGGTATCCGTACTCCGAAGCCCAAGTGAAATCGCTGGTGGTGCTGCTCAAGGACA
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| Amino Acid Sequence |
>hypothetical protein
MSDDAQRWKEKYLKSIEQQEKLERRWAARLDLLRRGLVRSTLAAEGTDRAVDQCMKEMRDVVRTDDMDAALAALLPRLEKAVLDSEQRRETRVDQISTAL TSLVTQLQKLPLPREVARPLKTFAKQLDGRVSQAREIPLLLSELSGLQGQALNNLEPDGETTRPGPGLLQRLFGSKDVATEPEASESTARPAPQPIVAKP VAEPQPPEQSEELTQALRAFAPPPQEKVASAVESAGPAKVADAVSETFVYEAPPQAEPVEASVVPVAYVERELPTEEPAPESALAAFIETPDVQVETPGE TTIGSLSLPPVLEVEESDPDELQADGTYALPDSPEPSYSSVAKHIEDTLLGLLEELSLPERHRPQAEAMRERLAHGLNWYELLPILDDLAVLMLAITDSG QHEFEAYLKQLNERLEAFQGHLQVASDGHADSRSAARELDTQIREQVDGLQSSVQEAADLESLKHVLESHLEGLLGTMDEHQQQRDQREQETAARLKGLA ERVANMEQEAQGYREHLEVQRQKALIDPLTGLPNRAAWSERLDHEVNAWHQRGNSLSLAMLDLDHFKRINDGYGHLAGDRVLKIIANVLRKRLRPTDFIA RFGGEEFVLLMPDSSLADALAAVEVLRGAIEACPFHFKGEPVTITVSMGVAQFQPGERSDLALKRADAALYRAKAAGRNQVQAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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