Strain | Pseudomonas fluorescens F113 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GAAATCGCCACCCGCGATCGCCTGCAACCGTCCCTGCTGGACCGGTTGACCGACGACGATCCGACCAACCCCAAGGAAAGCGCCGACAAGCGCGTGCTCT CCCTGACCCAATTGAAAGCCTCGGTGCTGCGTGACCTGGCGTGGCTGCTCAACACCACGTCATTGCTCAGCGCCGATGCCACGCTGCATACCCCGGCGGG CACGTCGGTGGTGAATTTCGGCCTGCCGGCACTGGCCGGCAACAGCGCGTCGAACGTCGATGTCTCGGCCCTGGAAACCTTGATCCACCAGGCCATTGCC ACCTTCGAACCGCGGATCCTGCGTCACACCCTGCGGGTGCGGGCCCGGGCCACGGCCGAGATGAACCACAACGCGTTGAGTTTCGAGATCGAAGGCGATC TCTGGGCCCAGCCGGTGCCGCTGCGCCTGATGCTGCAAACCGACCTGGACCTGGAAACCGGCCATGTGCGCGTGGTCAACGCCGACCAGCGGAGACGCTC
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DNA Sequence for Gene |
>PSF113_5804
|impG2
ATGAACCCACGCCTGCTGGAGCTGTACAACCAGGAACTGCACCACGTGCGCGAAAGCGCGGCGGAGTTCGCCAAGGAATACCCGAAGATCGCCAGTCGGC TGACGTTGTCCGGCATGGACTGCGCCGACCCGTATGTCGAGCGCCTGCTGGAAGGCTTCGCCTACCTGACGGCGCGGGTGCAGCTCAAGCTCGACGCCGA GTACCCGACCTTCACCCACAACCTGCTGGAAATCGCCTACCCGCATTACCTGGCGCCGACGCCGTCGATGACCGTGGTGCAATTGCAGGCCGACCCGGAC GAAGGCTCGCTGAGCAGTGGTTTCCCGCTGCCGCGCGATACGGTCCTGCGTGCCGCCCTGGGGCGTGAAACCCAGACCTGCTGCGAGTACCGCACCGCCC ACGCGGTGACGTTGTGGCCGTTGCAGGTCAGCCAGGCCGAATACTTCGGCAACCCGTCCGCCGTGCTCGGGCGCCTGGCCGCCAGCGAACCGAAAGCCAA GGCCGGCCTGCGCATCACACTGCGCACCGGCGCCGAGCTGCCGTTCAACAGCCTGGCCCTGGACAACCTGCCGCTGTACTTGAGCGGTGCCGACGAACAG CCTTTCCGCCTCTACGAACAACTGCTGGGCAATACCTGCGCAGTGTTCGCCCGCAAGCCCGGCGGCGACTGGGTGGAGCGGCTGCCCCAGGATGCGTTGC GCTCGCGCGGCTTCGACGATGCCGACGCCGCGCTGCCGGTGGTGCCGCGGGCCTTCCAGGGCTATCGCCTGTTGCAGGAATACTTCGCCCTGCCCCACCG TTTCCTGTTTGTCGACTTCACCCAGTTGAGCCGCGCGGTCAAGCGTTGCGACGGCCAGGAGCTGGAGCTGATCGTGCTGTTCGACCGTCACGACCCAAGC CTGGAAGGCAGCGTCGGCGCTTCGCAGTTCCTGCCGTTCTGCACCCCGGCCATCAACCTGTTTCCCAAGCGCCTGGACCGCATTCACTTGTCGGATCGGG TCAACGAACACCACGTGATCGCCGACCGTACCCGGCCGATGGATTTCGAAGTGCATTCGCTGAACGGCCTCACCGGCCACGGCACCGGGCCGGAGCAGCC GTTCCTGCCGTTCTACGCCGTGCGCGATCCGTCCCGTTACGGCCGCGACCAGGCCTATTACACCGTGCGCCGCGAACCGCGCGTGCTGTCCAGCGATCAA CGACGCAACGGCCCGCGCTCGACCTACATCGGCAGCGAAACCTTCGTCAGCCTGGTGGACAGCCAGCAAGCGCCCTATCGCCACGACCTGCGCCAACTGG GCGTGACCGCGTTGTGCACCAACCGCGACCTGCCGCTGTTCATGAGCGTGGGCAACGGCAAGACCGACTTCACCCTCGCCGACAGTGCTCCGGTGGGCGC CGTGCGCTGCGTGGCAGGTCCGAGTCGCCCACGGGCCAGCCACGCCCACGACGCCAAGGCCTGGCGGCTGATCAGCCAGTTGTCACTGAACTACTTGTCG TTGAGCGAACAAGGCCAAGGCGCGGCCGCCCTGCGTGAACTGCTGCGCCTGTACGGCGACAGCAACGACGCGGCGCTGCAATTGCAGATCGAAGGCCTGC GCGAAGTCAGCAGCAAGGCCTGCACCCGGCGCCTGCCGATGCCCGGCCCGATCGTGTTTGGTCGAGGCCTGGAAATCACCCTGGAATTCGATGAAAACGC GTTTCGCGGCACCGGGGTGTTCCTGCTCGGCGCGGTGTTCGAGCGCTTCCTGGCACGCTATGTGTCGATCAACAGTTTTACCGAGACGGTGATCCGTACC ACCGAACGCGGCGAGATCATGCGATGGAAAGCCAAGCCCGGACGTCGTCCGACCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTACCCTGGAGGCGATGCACCAGGAGCCCTGGGAATATGACTTCTTCCAGGCGCTGCGACGCATCGAGTGCGAATCCCCCGAGCTGCCGCGCCTGGGCCA TTCCCTGCGCCTGGCCGACGACCCGCTGCGCCTCGGGCAACGGGCCGAATGCACCTTCGCCCCGGCCACCCTTGCCTCGGTGCAACCGGGCAGCGATGGC GCGCCGGCACGCCTGGAGCAATTTTTCTTCGGTCTCGGCGGCCCCAACGGCCCGATGCCGCTGCACATCACCGAATACGTGCGCGAACGCCAGCGCAACA ACGCCGACAGCACCAGCAAGCGCTTCCTCGATGTGTTCCATCATCGCCTGCTCAGCCTGTTTTATCGGGCCTGGGCCGAAGCGCGGCCGACGGTCAGCCA TGATCGCCCGGACGATGACTATTGGTCGGCGCGCCTGGCCGCCCTCAGCGGTCGGGGGATGCCGAGCCTGCTCAACCAGGGGTTGATCCCCGACACGGCG
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Amino Acid Sequence |
>protein ImpG
MNPRLLELYNQELHHVRESAAEFAKEYPKIASRLTLSGMDCADPYVERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAYPHYLAPTPSMTVVQLQADPD EGSLSSGFPLPRDTVLRAALGRETQTCCEYRTAHAVTLWPLQVSQAEYFGNPSAVLGRLAASEPKAKAGLRITLRTGAELPFNSLALDNLPLYLSGADEQ PFRLYEQLLGNTCAVFARKPGGDWVERLPQDALRSRGFDDADAALPVVPRAFQGYRLLQEYFALPHRFLFVDFTQLSRAVKRCDGQELELIVLFDRHDPS LEGSVGASQFLPFCTPAINLFPKRLDRIHLSDRVNEHHVIADRTRPMDFEVHSLNGLTGHGTGPEQPFLPFYAVRDPSRYGRDQAYYTVRREPRVLSSDQ RRNGPRSTYIGSETFVSLVDSQQAPYRHDLRQLGVTALCTNRDLPLFMSVGNGKTDFTLADSAPVGAVRCVAGPSRPRASHAHDAKAWRLISQLSLNYLS LSEQGQGAAALRELLRLYGDSNDAALQLQIEGLREVSSKACTRRLPMPGPIVFGRGLEITLEFDENAFRGTGVFLLGAVFERFLARYVSINSFTETVIRT TERGEIMRWKAKPGRRPTL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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