Pseudomonas fluorescens F113, PSF113_4988

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0043039 tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00749
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006400 tRNA modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01428
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01428
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01428
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006424 glutamyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01428
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00749
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01428
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. IPR022380 Glutamyl-Q tRNA(Asp) synthetase 7 291 43.833065
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 24 35 2.3E-13
FunFam G3DSA:3.40.50.620:FF:000093 Glutamyl-Q tRNA(Asp) synthetase - - 1 290 5.0E-130
NCBIfam TIGR03838 JCVI: tRNA glutamyl-Q(34) synthetase GluQRS IPR022380 Glutamyl-Q tRNA(Asp) synthetase 7 272 1.3E-111
PANTHER PTHR43311 GLUTAMATE--TRNA LIGASE - - 5 237 9.5E-71
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 187 195 2.3E-13
Gene3D G3DSA:3.40.50.620 HUPs IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 1 284 7.5E-79
Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain 10 232 1.9E-47
SUPERFAMILY SSF52374 Nucleotidylyl transferase - - 7 286 1.29E-89
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 171 181 2.3E-13
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 10 22 2.3E-13
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 39 52 2.3E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.