Strain | Pseudomonas fluorescens F113 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCTCAACGGCGAGGCGCTGTTCAGCGGCTTGTACCTCAATGAACTGCTGATCCGCCTGCTGCCCGCCGAAGATCCCCATCCGGCCGTCTTCGACCACTAT GCCGCCACGCTGCTGGCCCTGGCCGAAGGCCGTCCGCTGGAACCGCTGCTGCGCTCCTTCGAATGGCGGCTGCTGGATGATCTGGGCTATGGCTTCGCCC TGAATACCGACCTGCACGGCGAGCCCATCGCCGCCGATGGCCTGTACCGCTTGCAAGTGGATGCCGGCCTGGAGCAGGTCTACCTGCTGCAACCGGGACT GTTCAACGGTGCCGAGCTGCTGGCCATGGCCGAGGCCGACTGGAGTGCGCCGGGCGCCTTGTCGGCGGCCAAGCGGCTGATGCGCCAGGCGCTGGCCGTG CATCTGGGCGGGCGGCCACTGGTCAGTCGCGAGCTGTTTCGCAAGCCCTGATCAACCCGTATGCTGTGGGCCGACTATTCGTCCATTCAGGAGCCTTTTC
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DNA Sequence for Gene |
>PSF113_4714
GTGAGCACCAGCAATCGCATTCTTCTCGGCGTGAACATCGACCATGTCGCCACCCTGCGCCAGGCCCGCGGTACGCGTTACCCGGACCCGGTCAAGGCCG CACTGGACGCGGAAGAGGCGGGCGCCGACGGCATCACCGTGCACCTGCGTGAAGACCGTCGCCACATCCAGGAGCGTGACGTGCTGCTGCTCAAGGATGT GCTGCAAACCCGCATGAACTTCGAAATGGGCGTGACCGAAGAAATGATGGCGTTCGCCGAGCTCATTCGCCCGGCGCACATCTGCCTGGTGCCGGAGACG CGTCAGGAGCTGACCACCGAAGGCGGCCTCGACGTAGCGGGGCAGGAGGCGCGGATCAGCCTGGCGGTGGAACGCCTGTCGAAGATCGGCGCCGAGGTGT CGTTGTTCATTGACGCCGACGAACGGCAGATCGAGGCGTCCAAGCGTGTTGGCGCGCCGGCCATCGAGCTGCACACCGGCCGTTACGCCGATGCCGAGAC GCCCACGGATGTGGCCGATGAGCTGCAACGAGTAGCTGATGGCGTCGCCTTCGGCCTGGCCCAGGGCCTGATCGTCAACGCCGGCCATGGCCTGCACTAT CACAACGTCGAAGCCGTCGCGGCCATCAAGGGCATCAACGAGCTGAATATCGGCCACGCGCTGGTGGCCCATGCCTTGTTTGTCGGGTTCAAGTCGGCTG TGTCGGAAATGAAAGCGCTGATCCTGGCTGCCGCCAGACCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCCGCCACAAAACCTAATGTGGCTACTCACTCAAGGCTTATCTGATTCATTGTGGCGAGGGGATTTATCCCCGCTGGGCTGCGCAGCAGCCCCCCCCC AAAAAAGCACTCAACTCAATCTGCCTGACGCACCGAGGCGCCAGATTTTAGGGCTGCTGCGCAGCCCAGCGGGGATAAATCCCCTCGCCACAGCGTCATG ACAGCATCAGGATGGTGTACAGCTGTTATAGCTGCGGGGATTCCTGGCTCGGCTTGCTCTTGTCGACACCCGGCACATGCAGGTTGCCCTCGGCCACCTG GTTGCCTTCGAGCTGCGGCTGCGTGACCCAGGTCAGGATGTCGTAGTAGCGACGGATGTTCGCCACGAAATGCACTGGCTCGCCGCCCCGGGCGTAGCCG TAGCGGGTCTTGCTGTACCACTGTTTCTGGGACAGGCGTGGCAGGATCTTCTTCACATCCAGCCACTTGTTCGGGTTCAGCCCTTCCTTGGCCGCCAGTT
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Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MSTSNRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLLLKDVLQTRMNFEMGVTEEMMAFAELIRPAHICLVPET RQELTTEGGLDVAGQEARISLAVERLSKIGAEVSLFIDADERQIEASKRVGAPAIELHTGRYADAETPTDVADELQRVADGVAFGLAQGLIVNAGHGLHY HNVEAVAAIKGINELNIGHALVAHALFVGFKSAVSEMKALILAAARP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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