Pseudomonas fluorescens F113, PSF113_4631

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens F113 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GGTGGCACCGTTCTGGCTGGACGACCTGAGCGCCGCCGGCATTCCCCACGAATGGAGCGCCGACATCCTCACCCGGCTCTGGCGCAAACTCGCACTCAAT TGCGCAATCAATCCGCTGACCGTGCTGCATCACTGCAAGAACGGCGGCTTGCAGGAGCACCGCTGCGAAGTGGCGACCCTCTGCGTGGAACTCACCGACC TGCTCGAACGTTGCGGCCAGCCCGCAGCGGCCGAAGACTTGCAGCCGGAAGTCGAACGGGTGATCCAGGCCACGGCCGCCAATTACTCCTCGATGTACCA GGATGTCGCCAATCGGCGCCGCACTGAAATCAGCTACTTGCTCGGTTACGCCTGCAAGGTCGCCCAACGCCACGAGCTGACCGTGCCGCACCTGGAGCAA CTGCGCCAGCGACTGATTGCCCACTTGCACAACCTCGCATTGCCCAGCGACTGAGCAGCGGCTACGCTGGCCCTCGTGTTCCTTTTTAGCGACGAGTCTG
DNA Sequence for Gene
>PSF113_4631
ATGCCATTGCGCCAGCGCCTTGAAAACCTCCCGGTCGGCCAGAAACTGCTGGCTGCCCTGTTGGTGTTGTTGACCACTGTCCTGCTGGTGGCCAACCTGA CCTTTATCAGCGCCGCCTACTACATTTCCCAGGAAAGCATGGCACCCCAGGCCCTGCAGACCATTGGCCGGCTGGTGGCCAATCCAAGCCTGATCTCCGA CGCCCTGCAGTCGCCACAAAGCGCCCAACGCTTGCTCGACGAGCTCAACAGCTACGCACCGCTGAGGGCGGCGGCACTGTACGACGGCCAGGGCGAACGC CTGGCACAACTGCAACAGGGCGAAAAGCTCAAGCTGCCGGACCATTACCGCAACATGCAGGCCTGGCAGGCCGGTGAGTTTCGCAGCAACCAGGTCATTA CCCTGCCCCGTCCCGGCACGGCGCCTGGCCATCTGTTGCTGGTGGCCAGCAGTGAATTGCCGACCGCGTTCTACACCGGCACCCTGACCGCCAGCCTCGG CATCCTGATTTTCAGCGTGTTGCTGTGGTTGATCATTGCCCAGCAGATCAAGCGCCTGATCACCCAGCCGATTCATCAGCTTGAAGAACTGTCACGCCAG GTCACCCGCGAAGAGAACTATGCCCTGCGCGCCGCACGCGGCAACCACGATGAGATCGGCAGCCTGGCCGAGGCGTTCAACACCATGTTGTCGCGGATCG AAGCCCGGGAGCAACAACTCAAGCGCGCGCGGGACGACTCCCAGGCCGCCTACGATCAGGCCCAGGGCCTGGCGGAAGAAACCCGTCATACCAATCGCAA GCTGGAGCTGGAAGTCCAGGTGCGCAGCAAGATCGAGAAAAAGCTCACCGGCTTTCAGAATTACCTCAACAGCATCATCGACTCCATGCCCTCGGCGCTG ATCGCTCTCGACGAGCAACTCTACGTCACCCAATGGAACCAGGAAGCCAGCGCTCTCTCCGGCACACGGCTGGACGAGGCGCTGAACCAGCCGATCTTCC TCGCCTTCGAACCGCTCAAACCGTACCTGCCCCAGCTCAAGCAGACCGTCGAGCAACACACGGTGGCCAAGATCGAACGCGTCACCTGGACCAAGGACGA CGAAGCCCGGCACTACGCCCTCACCTTCTACCCACTGATGGGCGGCGCCGGGCGTGGCGTGGTGATCCGCATCGATGACATAACCCAGCGCCTGTCGCTG GAAGAAATGATGGTGCAATCGGAGAAAATGCTCTCGGTCGGCGGTCTCGCGGCGGGCATGGCCCATGAAATCAACAACCCGTTGGGGGCGATCCTGCACA ACGTGCAGAACATCCGCCGACGCTTGTCGCCGGAATTGCCGAAGAACCTCGAACAGGCCGAACAATTGGGTATCCCGTTAGAGGAGGTCAATCGCTACCT CCAGGGTCGGGAGATCCCGCAGTTGCTCGACGGCATCCAGCAAGCCGGCGCCCGAGCGGCAAAAATCGTCACCCATATGCTCAGCTTCAGCCGGCTCAGC ACGCGGCAGATGGCACCCTGCGACCTACCGGCGCTGATTGACCAAGCGGTAGAAATCGCCGGTAACGACTTCGACCTGGCGATCGGTTTCGACTTCAAGG GCCAAGCGATCATCCGCCAGTTCGACCCGAACCTGGGCCCGGTGCCCGGCACGGCCAACGAACTGGAACAGGTGCTGCTCAACCTGCTGAAAAACGCCGC CCAGGCGATCCATCAACGCCAGGACGACAGCGAGCCGGGACGTATCATCCTGCGCACGCGGTTGAATCCGCCGTGGGCGGAAATCCAGGTCGAGGACAAT GGCATCGGCATGAGCGAGAACGTGCGCAAACGCACCTTCGAGCCATTTTTTACCACCAAGGAGATCGGCCAAGGCACAGGCCTTGGGCTGTCGGTCTCGT ACTTCATCATCACCAACAACCACAAGGGCCAGATGGAAGTGCAGTCGGCGCCGGGCCAAGGCACTTGCTTCACCTTGCGCCTGCCGCTGGCGGGCACGTC GATGGTGCCGCAAGAACACAAACAACTGGAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATGGGTTTTCGCCTGTCGAAGATTTACACCCGCACCGGCGACAAAGGTGAAACCGGGTTGGGCGATGGTCGCCGCGTGGCAAAGGACCACCCACGGGT CGAGGCCATCGGCGAAGTGGATACGCTGAACAGCCAGCTGGGCTTATTGCTGGCCGGGCTCGCCGCTGAAACAGCCAAGTACCCGGCACTGAAGGAAGTC AGCGACGTGCTGGGGCCTTGTCAGCATCGATTGTTCGACCTCGGTGGTGAACTGGCGATGCCGGCCTACCAGGCCTTGAACGTGGCGGAAATCGAGCGGC TGGAAGCGGCGATCGACGTGTGGAACGAGGAATTGGGGCCCCTGGAAAACTTCATCCTGCCCGGTGGTTCGACGCTGATCGCCCAGGCCCATGTCTGCCG CAGCCTGGCCCGCAGCGCCGAGCGCCGTTGTCAGCAACTGAACGCGGTGGAACCGCTGGCCGGGCCGGGGCTGGCCTATATCAATCGGTTGTCGGATCTG
Amino Acid Sequence
>Sensory box histidine kinase
MPLRQRLENLPVGQKLLAALLVLLTTVLLVANLTFISAAYYISQESMAPQALQTIGRLVANPSLISDALQSPQSAQRLLDELNSYAPLRAAALYDGQGER LAQLQQGEKLKLPDHYRNMQAWQAGEFRSNQVITLPRPGTAPGHLLLVASSELPTAFYTGTLTASLGILIFSVLLWLIIAQQIKRLITQPIHQLEELSRQ VTREENYALRAARGNHDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQAAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFEPLKPYLPQLKQTVEQHTVAKIERVTWTKDDEARHYALTFYPLMGGAGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPELPKNLEQAEQLGIPLEEVNRYLQGREIPQLLDGIQQAGARAAKIVTHMLSFSRLS TRQMAPCDLPALIDQAVEIAGNDFDLAIGFDFKGQAIIRQFDPNLGPVPGTANELEQVLLNLLKNAAQAIHQRQDDSEPGRIILRTRLNPPWAEIQVEDN GIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSAPGQGTCFTLRLPLAGTSMVPQEHKQLER
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site