Pseudomonas fluorescens F113, PSF113_4586

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens F113 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CTGCGCTCCTTTGCCCGGCGTGGGGACGACCAGGGCCAGGCCAGCCTCGGCAAAGGCGTCGAGGCCGCGCTGCAACTGCTGGGCGCTCGTCTTGAAAGCT TGAACATCCAGATTCATTCCAGTTTCGACGACGTCCAGGTGCAAATTGACCAGACGCGCCTGGAGCAGATCCTGGTGAACCTGATCGGCAATGCCCTGGA CGCCATGCAGACACAACCCGAACCGCAGCTGTGGCTCGAAGGCCAGGCAGGCGATGGCAAATATCGCCTGCGTGTGCGAGATAACGGCCACGGTATTGAC CCAGAAGCACGCAAGCATCTGTTCGAACCCTTCTTCACCACCAAACCCGGCGAACAAGGCCTGGGCCTGGGCCTGACGCTTTCCGCCAGCCTGGCCGCCG CCACGGGCGGATACCTGGGCGTCGAGCACCCGGTTGAGGGCAGTGGAACCACATTTGTCCTCAGTTTACCGTTGGTCAGCCTTTCACCTGTCGAGCCGCT
DNA Sequence for Gene
>PSF113_4586
ATGAACCACGACCTGAGCGTACTGATCGTCGAAGACGACCCCCACGTCCTGCTGGGCTGCCAGCAGGCCCTGAGCCTGGAAGACATTCCCTGCATCGGCG TGGGCAGCGCCGAAGAGGCCCTGGAGCGCGTCGACGATGACTTTGCCGGCATCGTCATCAGCGACATTCGCCTGCCGGGCATCGATGGCCTGGAACTGCT GACCCGCCTCAAGGCGCGGGACCGCAGCTTGCCGGTGGTGCTGATCACCGGCCACGGCGACATCTCCATGGCCGTAGGCGCCATGCAAAAAGGCGCCTAC GACTTCATGGAGAAGCCCTTCTCCCCTGAACGCCTGGTGGACGTCGCCCGCCGTGCCCTGGAGCAGCGCAGCCTCGCCCGGGAAGTGTCATCGCTGCGTC GGCAATTGGCCGAACGCGATTCCCTGGAAGGCCGGATCATTGGCCGCTCGCCCGCCATGCAGCACCTGCGCGCGCTGATCGCCAACGTCGCCGACACCTC GGCCAACGTGCTGATCGAAGGCGAAACCGGCACCGGCAAGGAACTGGTCGCCCGTTGCCTGCATGACTTCAGTCGACGCCACGACAAACAGTTCGTCGCA TTGAACTGCGGCGGCCTGCCGGAGAACCTGTTCGAAAGCGAGATTTTCGGCCACGAAGCCAATGCCTTTACCGGCGCCGGCAAACGCCGGATCGGCAAGA TCGAGCACGCCGATGGCGGCACGCTGTTTCTCGACGAAGTGGAAAGCATGCCCCTGCCCTTGCAGATCAAGTTGCTGCGCGTGTTGCAGGAACGCACTCT CGAGCGCCTGGGTTCGAACCAGAGCGTGGCCGTGGATTGCCGGGTAATCGCCGCCACCAAGTCCGACCTGGACGAAATGGGCCGGGCCGGACAGTTCCGC AGCGACCTGTATTATCGCCTCAACGTGGTGACCCTGGAGCTGCCGCCACTGCGCGAGCGGCGCGAAGACATCCTGCAACTGTTCAAGCACTTTCTCCAGC AGTCGTCCCTGCGCTTTGACCGCACGGTGCCGGAGCTGGACAACCAGACCCTGTCGAACCTGATGAGCCACGACTGGCCGGGCAACGTGCGCGAACTGCG CAACGTCGCCGAGCGTTATGCCCTGGGCCTGCCGGCGTTCAAGCGCGCCGGCGCCAGCGGTGGTAACCAGGGCCTGGCCTTCGCCGAAGCCGTGGAAGCC TTCGAGCGCAACCTGCTGGTGGACGCCCTGCAACGCAGCGGTGGCAACCTGACCCAGGCCAGCCTGGAGTTGGGCATGGCCAAGACCACGCTGTTCGACA AAGTCAAAAAATATGGCCTGAGCCATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGGGCGGGAAACCTGTGGATCTGATTTTCAAGGCGGCGCTCGGTGCAGCCGTGGTGGTCATCCTGGCAATGCTGGCCAAGACCAAGAACTATTACATCG CCGGGCTGGTGCCGCTGTTCCCGACCTTCGCCCTGATCGCCCATTACATCGTCGGCAAGGGCCGCTCGGTGGACGACCTGAAGACCACCATCGTGTTTGG GATGTGGTCGATCATTCCGTACTTCGTCTATCTGGCGACGCTGTACGTGATGGTCGACCGCATGCGCCTCGAAGCCTCATTGGCCGTGGCAGCCGTCGCC TGGCTGATGGCGGCGACGGTGCTGGTCAGCACTTGGGTACGGCTTCACGGCTGATCTCTGATCAATAGCCGACGGTAAACCGCGTGCGCGAAAACTGCGG CGTTTCCACTTCATCGATCATCGCGATAGCGTAATCGGCAAAGCTGATCCAGCTACGCCCGGCATCATCGAACAGCAGGTGATTCTTGCCGAGGCGAAAC
Amino Acid Sequence
>Sigma-54 dependent DNA-binding response regulator
MNHDLSVLIVEDDPHVLLGCQQALSLEDIPCIGVGSAEEALERVDDDFAGIVISDIRLPGIDGLELLTRLKARDRSLPVVLITGHGDISMAVGAMQKGAY DFMEKPFSPERLVDVARRALEQRSLAREVSSLRRQLAERDSLEGRIIGRSPAMQHLRALIANVADTSANVLIEGETGTGKELVARCLHDFSRRHDKQFVA LNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHADGGTLFLDEVESMPLPLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLDEMGRAGQFR SDLYYRLNVVTLELPPLRERREDILQLFKHFLQQSSLRFDRTVPELDNQTLSNLMSHDWPGNVRELRNVAERYALGLPAFKRAGASGGNQGLAFAEAVEA FERNLLVDALQRSGGNLTQASLELGMAKTTLFDKVKKYGLSH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site