Pseudomonas fluorescens F113, PSF113_4551
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens F113 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGGGAAATAGCGGTAGTAACGCTCGGCGGCAGCCTCGATGGCGCCACTGTCTTCGAGTTTGCGGGCCTCGGCCAGGTAGGTCAGGCGGCCCACAGCCTG CACATCCTCGGCGCCCCGCTCACCCACCAGCATCGAACACTTGGGGTCTTTTTGCAGATTGTGAGTGTGCTGGGCGATGCGGCTGATCAGGATCAGTGGC CGACCTTGTTCGTCCAGGCAATACGGCACCACGGAGCCGAACGGAAAGCCGGGCATGGATTTGGAATGAGTGGCGAGCACTCCACGGTACTCCTTGAGCA GCAGTTCCCGGGCATGCTTGGCAGCTTCAACGCTCAATTTATGACTCCTTTTATGAAAACCGTATAGAAAACGGTCAGGTGACTGGAGTAATGTTCCGAT ACGCCTATGGGACAATTCTCGAGTACAGACGGCTACACCGTCGCCAATCGAGAGACCTCCCAAAAGGCCCCCTCCACCGCTGCGCCATCTGGACATGAGC
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| DNA Sequence for Gene |
>PSF113_4551
ATGCAACTCACTGACAAAGTAATCATTATCACCGGCGGTTGCCAGGGTCTGGGCCGCTCCATGGCCGAGTATTTCGCGGATAAAGGCGCGAAGCTGGCGC TGGTAGACCTCAACCAGGAAAAACTCGACCAGACGGTGGCCGCCTGCGCAGCCAAGGGCGTCGAGGCGCGTGCCTACCTGTGCAACGTTGCCAATGAGGA GCAGGTGATCGACATGGTTGCCCGGGTCGCCGAGGACTTCGGTGCGATCCACGGCCTGATCAACAACGCCGGGATCCTGCGTGACGGCCTGCTGCTCAAG GTCAAGGACGGCGAAATGACCAAGATGAGCCTGGCCCAGTGGCAGGCCGTGATCGACGTCAACCTCACCGGTGTATTCCTGTGCACCCGTGAAGTGGCAG CGAAAATGGTCGAGCTGAAGAACAGCGGCGCCATCATCAATATCTCGTCGATCTCCCGCGCCGGCAACGTCGGCCAGACCAACTACTCGGCCGCCAAGGC CGGTGTGGCCGCCGCCACCGTGACCTGGGCCAAGGAACTGGCGCGCTACGGCATCCGTGTCGCCGGCATCGCACCGGGCTTCATCGAAACCGAGATGACC CTGGGCATGAAGCCCGAGGCCCTGGAAAAAATGACCTCGGGGATCCCGCTCAAGCGCATGGGCAAGCCTGAGGAGATTGCGCATTCGGCGGCGTATATCT TCGAGAACGACTATTACACCGGCCGGATCCTGGAGATGGATGGCGGGTTGCGGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCCTCCGCCTAACAAAATGTGGGAGCAAGCCTGTGGGGGGCAAAGCCTACAAGCTTGCTCCCCACATTAGATTGCATTTCAGCTGATCAATCGTCGCTG ACAGTGATGTTCGGCATCGCCGGCATGGCCGCTTCCTGCAACACGATCCGCGCGCCCACGTGGCGGGCCAGTTCCTGATAGACCATGGCGATCTGGCTGT CCGGTTCGGCGATGACCGTCGGCTTGCCGCCGTCGGCCTGTTCGCGGATCACCATCGACAGCGGCAGCGAAGCCAGCAATTCGACGCCGTACTGGGTCGC CAGTTTTTCCCCGCCTCCTTCGCCAAACAGGTGCTCGGCATGTCCGCAATTGGAGCAGATGTGCACGGCCATGTTCTCCACCACACCCAGCACCGGGATG TTCACCTTGCGAAACATTTCCACGCCCTTGCGTGCATCCAGCAGGGCCAGGTCTTGAGGGGTGGTAACGATCACCGCACCGGCCACCGGGACTTTCTGTG
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| Amino Acid Sequence |
>3-oxoacyl-ACP reductase
MQLTDKVIIITGGCQGLGRSMAEYFADKGAKLALVDLNQEKLDQTVAACAAKGVEARAYLCNVANEEQVIDMVARVAEDFGAIHGLINNAGILRDGLLLK VKDGEMTKMSLAQWQAVIDVNLTGVFLCTREVAAKMVELKNSGAIINISSISRAGNVGQTNYSAAKAGVAAATVTWAKELARYGIRVAGIAPGFIETEMT LGMKPEALEKMTSGIPLKRMGKPEEIAHSAAYIFENDYYTGRILEMDGGLRI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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