Pseudomonas fluorescens F113, PSF113_4434

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003955 NAD(P)H dehydrogenase (quinone) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01755
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0010181 FMN binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01755
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03358
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc superpathway of photosynthetic hydrogen production InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pfe00130 Ubiquinone and other terpenoid-quinone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc vitamin K-epoxide cycle InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pfe01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03358 NADPH-dependent FMN reductase IPR005025 NADPH-dependent FMN reductase-like 12 126 1.7E-9
NCBIfam TIGR01755 JCVI: NAD(P)H:quinone oxidoreductase, type IV IPR010089 Flavoprotein WrbA-like 6 193 1.7E-42
Gene3D G3DSA:3.40.50.360 - IPR029039 Flavoprotein-like superfamily 1 196 5.7E-65
PANTHER PTHR30546 FLAVODOXIN-RELATED PROTEIN WRBA-RELATED - - 6 193 3.3E-39
FunFam G3DSA:3.40.50.360:FF:000001 NAD(P)H dehydrogenase (Quinone) FQR1-like - - 1 198 8.4E-64
SUPERFAMILY SSF52218 Flavoproteins IPR029039 Flavoprotein-like superfamily 4 196 1.83E-60

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.