Pseudomonas fluorescens F113, PSF113_3703

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens F113 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CTTGATCAGTTCATGGGTTTCCAGCGCAACCAGTTCGATCGGCTGGTGCATTTCAGCTACGGCCTGCTGCTGGCCTATCCGCTGCGCGAGGCCTTGCTCC GGGTTGCGCCAGCAACGGGGTTCAGGGGTTATTTCCTGGCCTGGAGCCTGATTCTCGCGTCGTCGGCGATTTATGAAATCATCGAATGGTTGGGCGGCGC CTACATCGGGGGCGATACCGCCAAGGCCTTTGTCGGTGCCCAACAGGACCCGTGGGATTCGCAAAAAGACATGGCCCTGGCGGCACTGGCCGCGTTCATA ACCCTGCTCGTCGCCGCCGGGGTCAGTTACCTGCGCCAGCGGGACTTCGCCCTCGAATGGACGTTGCGCTTCAAGGCCCGAACATGATGCAAGCCCCGAT ATCCGCCAGTTCCCGTGCGATCACGACTAAGTAAATCAGCCCACCAGCCGATACAAGACAGGTGCGGGTGAAATCGCTTTTTTGCTGATGACTTATTTTT
DNA Sequence for Gene
>PSF113_3703
ATGATTGAAATTGCTGGCAATGACTCGACTGTCCCTTCCCTGGGTTCGCCAACCCGAAGTTTCACCCGTCGCACTTTCCCGGCCATCATGCTCCTGCTGT TTGTCATGTCCGCACTGGCGATCGCCGTGCTGCTCAACATCACCGCGGCCCAGGACCAGCGCGCCCGTGAACAGAGCCTGTTTTTCGCCCAGCGGGCCAT CGAGGGAATCCGCAAAGGTATCGGACGGGACCTGAGCGACTACTCCAAGTGGAGCGACGCCTACCGGCACCTGCATGTCAGCGTCGACAAGGAATGGGCC TATGACCAGGAAAACGTCGGCAGCAGCGTGTCCTCGCTCTATGGCTACCAGGCGGTGTTTGTCATTTCGCCGACCGGCCAGACCGTCTATTCAGTGATCG ATGGCCAGATGAGTGAAGTCGATGCCGACACCTGGCTGACCGGCGACTTGCGAGCGCTGTTGAAAAAAGCTAGCGCTGCGGAAAATCACGAGGAAGTGAT CGTCGAGATGCTCCATCACGAAGACGCCCCGGCGTTTGTCGCCGCATCCGCCATCACCATAGGCACAGACAGCAGCGTGCCGGAGATCCCCGGCCCGCCC AGCCTGATGCTCTTCGTCAAGGTCCTTGATCCCGGTGCCCTGGAAAACCTGGCGCGGGACTTCGCCCTGCCCGATGCCCATATCGCCAGGACCCCGGGCC CAGCCGATACCGCCCAACTGCTGCTCGACGACCTGACCCTGGAAGCCTTGGCCTGGCGGCCGCAGACCCCGGGCCAGGACCTGCGCAAATTCCTCCTGCC GTTGCTGGCCGTGGCGTTACTGGTGCTGGGGGTTCTGGCCCTGGCCGTTCTGCGCCATGCCTTGGCCATGCTCCGCGCCCAGGAACGCCAATACGCCAGC CTGCTGGCCCACCGCAAGGCGCTGGAACGCAGTGAAGAACGTTTCCGCGACATTGCCGAAGTCTCATCCGACTGGTTGTGGGAGGTTGATTCGACCGGGA CCCTGACTTATCTGTCGGAACGCTTCGAACAAGTGACCGGTTTCAGTCCCACGGAGTGGCTGGGCAAACCTCTGCACCGGCTGCTCCACCCCCATGGCGG CTCGATCTCGATTGCCCAATGGCTGCTCGGCGGCGCCAACAGCGTCTCTTCGGCGCCGCTGCTGTGCGAGTACACCGCGCGCAACCAGCGCATCCGTACC TGCAAACTCTCGGTGCGGGCCATCGAAGCTGGCACCCTCGGGTTTCGCGGCACGGCCACTGACATCACCGACGAATTGCGGGCACTGGCCCAGATCAAGC ACCTTTCCCTGCATGATCCACTGACCGGGCTGGCCAACCGCAACCGCTTGTTCGATTGCCTGCGCGAACACCTGGACCGGACCGATCGCCCGCCCCTGGC GCTGCTGAACCTGGACATGGACCGGTTCAAGCCGGTCAACGACTCCCTGGGTCATGCCGTGGGCGATAAAGTGCTTAAGGAAGTGGCGCATATCCTCCAG CAAAACGTGCGTGGCACCGATCTGGTGGCGCGCCTGGGCGGTGATGAGTTTGTCATTGTCATGCCCGAGCCCGGCGATGCCGACAATCTCGATCAACTCT GTGAACGGCTGATCGATTGCATGCAACGGCCCATGCACCTGGACGGCAATACCCTGTACCTGGGGGTGAGCATCGGCGTTGCCTGGTCGCAGCCCGGTGA CGAACGTGCCGATGAACTGCTGCGCCACGCCGACATCGCCTTGTATGCGGCCAAGGCGGCGGGCCGCAACACCTGGCGCGTGTATGTGGAAGCCATGGGC AACCTGGCCCGCGACCGGCGGCAATACGAGCAGCAACTGCGCGACGCCATGCAACGGGATCAACTGGAACTGCGCTACCTGCCCCGCTTCGATGTGAGCG CCGAACAACTGCATGGCTTCGAAGCCCAGACCTTCTGGCACCATCCCGAGAAAGGTGAACTGGGTGGGGCCGACTTCATACCGGTGGCCGAAACCTCGGG CCAGCTTGAAGAACTGGGCACCTGGATGTTGATCAACGTCTGTGAAGAGGCCGCCACCTGGCCGAGCGCCGTCAACGTCTCCATCGCAGTTTCACCCCGG TGGTTCAACAGCAGTTTCCTGCTCAACCAGGTACAAACGGCCCTCGAAGCGAGCGGCCTGGCGCCTCAACGGCTGACCCTGGAAGTGGCTGAAGGGGTGC TGCTGGCCGACCACAAGACCGTCGCCAGCACCCTTCATGCGCTCAAGGACCTCGGCGTGCGGATCAACATCGACAAATTCGGCACCAGCATCGCCTCCCT GCGCGAGGTACTGGACCAGCCGTTCGATGGCATCCGCTTCGATCGCAACATCCTCACGCAGCTGGGCCTGGAGGATGACAAGGAAGGCGTCCTGGCGATG ATCCGCTTGAGCCGCAGCGTGGGGCTGATGGTCACTGCCGAAGGCATCGAAAACGCCCGGCAATTCAGCCAACTGCGCAACGTAGCCTGCGACCATGTCC AAGGCCCCTACTTCGGCGCGGCCCTGGCCCGCTCGGAAATGGCCTCGTTCTTCACCACGCCGCGGTGGCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCACCTCCCCACCGCTATCGCGAGCAAGCTCGCTCCCACAATAGGTTCTGCGGTGCATGCAGAGCTTATGAACGCCTCAAGCCCCCTGTGGGAGCGAGC TTGCTCGCGATGAGGCCTGCACAGCCGACATCCCTGCAAGCTCGGTCTCTTACAAACTCAACCGCCCCCGCTCCTCCTCAGTCAGCCGCTGGCGGTTCTG CTCATCCAAAGGTCCCGCACCCAGGACCTGCACCGGGCTGGCCGGGTCGTAGGCCCGAGGCGCTTCGCGGCTGGCGCCGTCGCGGGACGGGGCCAGTTGC TCGGAGCCAAAGCTCACCACCTGCACGGTAAACACCGACGCCTGGTTCTGCCGCGCCGCGTTCTGTTGCTGACGCGCCACGTCTTCAGCGGCCTGCGTCG CCGAAGACGCCGCCGAACTGGCCGAGGTTATGGCTCCGGTGTTCACCGAGGCCGCCAGCGGCACGCCGGTGGATTTGCCCTGGGTCTGGATGTTGGCCGC
Amino Acid Sequence
>PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
MIEIAGNDSTVPSLGSPTRSFTRRTFPAIMLLLFVMSALAIAVLLNITAAQDQRAREQSLFFAQRAIEGIRKGIGRDLSDYSKWSDAYRHLHVSVDKEWA YDQENVGSSVSSLYGYQAVFVISPTGQTVYSVIDGQMSEVDADTWLTGDLRALLKKASAAENHEEVIVEMLHHEDAPAFVAASAITIGTDSSVPEIPGPP SLMLFVKVLDPGALENLARDFALPDAHIARTPGPADTAQLLLDDLTLEALAWRPQTPGQDLRKFLLPLLAVALLVLGVLALAVLRHALAMLRAQERQYAS LLAHRKALERSEERFRDIAEVSSDWLWEVDSTGTLTYLSERFEQVTGFSPTEWLGKPLHRLLHPHGGSISIAQWLLGGANSVSSAPLLCEYTARNQRIRT CKLSVRAIEAGTLGFRGTATDITDELRALAQIKHLSLHDPLTGLANRNRLFDCLREHLDRTDRPPLALLNLDMDRFKPVNDSLGHAVGDKVLKEVAHILQ QNVRGTDLVARLGGDEFVIVMPEPGDADNLDQLCERLIDCMQRPMHLDGNTLYLGVSIGVAWSQPGDERADELLRHADIALYAAKAAGRNTWRVYVEAMG NLARDRRQYEQQLRDAMQRDQLELRYLPRFDVSAEQLHGFEAQTFWHHPEKGELGGADFIPVAETSGQLEELGTWMLINVCEEAATWPSAVNVSIAVSPR WFNSSFLLNQVQTALEASGLAPQRLTLEVAEGVLLADHKTVASTLHALKDLGVRINIDKFGTSIASLREVLDQPFDGIRFDRNILTQLGLEDDKEGVLAM IRLSRSVGLMVTAEGIENARQFSQLRNVACDHVQGPYFGAALARSEMASFFTTPRWL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site