Pseudomonas fluorescens F113, PSF113_2360 (dht)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens F113 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATGACGCGCCGAGCTGACTGGATGATCGATATAACCCTTTCAACCTTTTGATATTTAACGCTTTAAATCGAACTGATTACCTTGCTCCGCTCTTTGCTCA CCGATGTTGAGGCTAGATGACCTTCACGCGCTGTCGAGTGGAAGATTCAAAGTGGTGCGTCCCTAATTAATGCGAGGTGTCTGGACCGCACTTCAACCGC ATTCAACCCGCTGATTTACCATCATAAATCTCGCTCAAATAACGATCCTGTCAAGTGCGTCAAAATGGTGAGCACGCTCACCAATTTGGTGATTTCATTA CTTAACTCTTTAATTTCAATGACTTAATAAGAACATAAGCTTATAAAAAATTATCTTGCTCATTTCAATAACTCCAGCTAGCGTCTAATCCTGACAGTCG TGACAAGAATATAAATCTGCACGACGCCGTCACCTAACAACCGTGATCGATAAAACATAAAGAACCGGCAACAGTCGGTCATGCCTGCGAGGAACTCGGA
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| DNA Sequence for Gene |
>PSF113_2360
|dht
ATGTCTCTGTTGATCCGTGGTGCCACCGTTATTACCCATGATGAAAGTTATCGCGCCGATGTGTTGTGTGCTGACGGCGTGATCAAGGCCATTGGTGAAA ACCTGGATGTTCCAGCCGGCGTCGAAGTGCTCGATGGCAGCGGCCAATACCTGATGCCCGGCGGCATCGACCCTCATACGCACATGCAGTTGCCGTTCAT GGGCACGGTCGCCAGTGAAGACTTCTTCAGCGGCACGGCGGCGGGCTTGGCCGGGGGCACTACATCGATCATCGATTTCGTGATTCCCAACCCCCAGCAG TCGCTGATGGAAGCCTTTCATCAGTGGCGTGGCTGGGCCGAGAAGAGCGCCAGCGACTACGGTTTTCACGTGGCAATCACCTGGTGGAGCGAGCAGGTCC GCGAAGAAATGGCCGAGTTGGTCAACCATCATGGCGTGAACAGCTTCAAGCACTTCATGGCCTACAAGAACGCAATCATGGCCGCCGATGACACCTTGGT GGCGAGCTTCGAGCGCTGCCTGGAACTGGGCGCGGTGCCCACCGTGCACGCGGAGAACGGCGAGCTGGTCTATCACCTGCAACGCAAGTTGCTCGCCCAG GGCATCACCGGGCCCGAAGCCCATCCGTTGTCACGCCCCTCGCAAGTGGAAGGCGAAGCCGCGAGCCGCGCCATCCGCATCGCCGAAACCTTGGGCACGC CGCTGTACCTGGTGCATGTGTCCACCAAGGAAGCACTGGACGAAATCACCTACGCCCGCAGCAAGGGCCAACCCGTCTACGGTGAAGTACTCGCCGGGCA CCTGTTGCTGGACGACAGCGTCTATCGCGACCCGGACTGGCAGACCGCCGCCGGCTATGTGATGAGCCCGCCCTTCCGTCCGCGCGGGCATCAAGAGGCA CTCTGGCACGGCTTGCAGTCCGGCAACCTGCACACCACCGCCACCGACCACTGCTGTTTCTGCGCCGAACAGAAAGCCGCCGGCCGTGACGACTTCAGCA AGATCCCCAACGGCACCGCCGGTATCGAAGACCGCATGGCGGTGCTCTGGGACGAGGGGGTCAACAGCGGCAAATTGCCGATGCACGACTTCGTCGCCCT CACCTCCACCAACACCGCGAAGATCTTCAACCTCTACCCACGCAAGGGGGCGATCCGCGTCGGTGCCGACGCGGACCTGGTGCTCTGGGATCCTCAGGGC AGCCGCACGATTTCCGCCAAGACCCACCATCAGCAAGTGGACTTCAACATCTTCGAAGGCAAGACCGTACGCGGCGTACCCAGCCACACCATCAGCCAGG GTCGGCTGGTGTGGGCCGACGGCGACTTGCGGGCCGAACGCGGCGCCGGGCGCTACATCGAGCGGCCGGCGTACCCGGCGGTGTTCGATTTGCTGAGCAA GCGGGCGGAGTTGAATAAACCCACTGCCGTAAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCAGGATCGTTCCCACGCTCTGCGTGGGAATGCCTCTGGGGACGCTCCGCGTTCCGCTTTGGGACGCAGAGCGTCCCGGGATGCATTCCCACGCGGAG CGTGGGAACGATCGAGCCCGGACAACGAAAAAACCACTGCCCACCAGAGGCAGCACCTCAAACACCGTGAGGCCCACTCCATGATCCAGCCCTTGAGTCA CCTCCCCCATTCCCAGGAAGACCCGGCCACCCTCGCCGCTCGCTTCAGCGACCTGGCGCCGCCACTCAACGCGCGCCAGGCCCACCTGGAAGCGTCCCGG TGCCTGTACTGCTACGACGCGCCGTGTGTGAATGCTTGCCCAAGCGAGATCGACATTCCCTCGTTCATCCGCAACATCCACCAGGACAACGTCCAAGGCG CGGCGCAGAAGATTCTGTCGGCCAACATCCTCGGCGGCAGTTGCGCCCGGGTCTGTCCCACCGAGGTCCTTTGCCAGCAAGCCTGCGTGCGCAACAACGC
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| Amino Acid Sequence |
>protein Dht
MSLLIRGATVITHDESYRADVLCADGVIKAIGENLDVPAGVEVLDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPQQ SLMEAFHQWRGWAEKSASDYGFHVAITWWSEQVREEMAELVNHHGVNSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLLAQ GITGPEAHPLSRPSQVEGEAASRAIRIAETLGTPLYLVHVSTKEALDEITYARSKGQPVYGEVLAGHLLLDDSVYRDPDWQTAAGYVMSPPFRPRGHQEA LWHGLQSGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNSGKLPMHDFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQG SRTISAKTHHQQVDFNIFEGKTVRGVPSHTISQGRLVWADGDLRAERGAGRYIERPAYPAVFDLLSKRAELNKPTAVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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